Gene detail

Detailed information of ENSLDHP00000015273.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: CAB3987615.1, VAC14 homolog [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000016595

ATGGCTGAAAAGGATATGTTTCCTTTGAACCCGACCTTAATGCGAGGTTTGAACGATAAATTGTACGAGAAAAGAAAGATTGCAGCCTTAGAAATTGAACGTATGGTTAAAGAATTCATAGCGAACAATGATGTTGCAATGATAAAAAGGCTCACGTCGGTCCTAACAACAGAATTTTCAGTTTCCCATAATCCCCATAGTCGTAAAGGTGGGCTGATTGGGCTAGCAGCTACTGCAATTGCTTTAGGAAAGGAATCAGTAGCTTATCTCGAGGAGTTAATACCACCAGTGATGTCGTGTTTTTATGACCAAGACAGCCGTGTTCGATACTATGCATGTGAGGCCTTGTATAACATTTCCAAGGTTGCCAGAGGAGCTGTTCTGCCATTTTTTAATCAGATATTTGATGGACTTAGCAAGTTAGCATCAGACACTGATCCTAATGTGAAGAGTGGAGCTGATTTACTGGACAGATTGATCAAGgaCGTTGTAACAGAGAGTACTTCGTTTGATCTTGTGTCTTTCATTCCTTTACTGAGAGACAGAATGCACACAACAAATCCTTTTGCTAAGCAATTCATTGTTTCATGGATTTTAGTTCTGGATTCAGTTCCCGACCTTGATATGATAGTTCACTTGCCTGAGATTCTGGATGGTATTTTCATGATATTTCAAGATAGATCAgctgaaataagaaaaatGTGCGAAGCAGTTCTCGGAGAGTTTCTGCGCGAGATAAAGAAGTCGCCTGACAACGTAAACTTTGCTGATATGGTCAACATTATTGTAGTTCATTCCACTTCTAATGATGAGATAATCCAATTCACGGCTGTGCTTTGGTTGCGGGAGTTTCTGTCTCTTTCTGGTCGAGCAATGATTCCGTACTGCGCAAACATACTGTCTGCTGTCTTACCCTGTGTCTCATACGAACATTGTAAATTTAATACTAAGGAAGTTGCAACCAATGTCAATCAGCGTGTCCGAGATCTTATCACGACAGATGACGATAACGAAACGAATTCTCCCGAGCAGTGTACGAAAAACTCCGAAAAAATGGACTGTGACGTGGAATCGGCGGAATACAACTTGGATCTTGGATCTGTCCTGACCGTTCTCACCTCTCAACTGACCAGTGAGTTTGTACAGACCCGTCTGGCTGTACTGAGATGGGTGATGTTGTTCTTAGAAAAAACACCGAATAAGCTATTCAAGCACATGGAGAAAATATTTCCTGTTTTATTGAATCGAGTATCAGATTCATCTGACGATGTTGTGATGGCAGATTTGGAAGTGCTATCCGTAATCTCGGCCTCAGAAGCTGGGCAACCTATGTCGTCTGGGATTGCCAATGGAACGTCATCGGCCAAAAATATGAatgaatatttttataaatttctattGAACTTGGTAGCGAAGTTTCGAGTAGACGGAAAATTACTAGAGGAGAAAGGCTGTTTTATTATTAGACATCTGTGCTTGTTGCTGAGTTCCGAGGACATTTATCGTACCTTAGCTGAAATTCTTTTACAAGAGAacgatttaaaatttgcatCGTTGATGGCAAAAACACTGAACATTATTTTACTCACTTCAAGTGAACTGTTTGAACTGCGACACAAGTTAAAAGAGTTGAAAACCAGGGAAAGTTGTGACTTATTTAGCACCTTATACAAGTCTTGGTGTCATAATGCTGTTGCTACATTCTCGCTGTGTCTTCTAACACAGACATACCAACATGGCTGTGAACTTCTGATGACGTTCGGTGATCTCGAAGTTCACGTTGATTTTTTAGTTCAAATAGACAAACTGGTGCAGCTAATAGAATCACCGATATTTACTTATTTAAGATTGCAACTTCTGGACACACAGAATAATTTTTATCTTTTAAAATCGTTGTATGGTCTTTTAATGTTGCTGCCACAAAGCGATGCATTTACAACATTACGTCATCGACTGGACTGCGTGCCCAATGGTCATCTTTTGCAGGCACCACAAACTAAGGGTAAGGACATCGAGAAACGGGAATATGTGAAGAAAATCGACTTTGCTGCCTTACTGCAACATTTTAAAACTGTCCAAGAGAAACACGTGACTCAGAGACATGAAAAAGAACCAATCACAAACAGGCTGGAACCTGCCTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q5ZIW5	Protein VAC14 homolog OS=Gallus gallus OX=9031 GN=VAC14 PE=2 SV=1
Q68F38	Protein VAC14 homolog OS=Xenopus laevis OX=8355 GN=vac14 PE=2 SV=1
Q66L58	Protein VAC14 homolog OS=Danio rerio OX=7955 GN=vac14 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12755	Vac14_Fab1_bd	Vacuolar 14 Fab1-binding region	Repeat	Interproscan
PF11916	Vac14_Fig4_bd	Vacuolar protein 14 C-terminal Fig4p binding	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021133	Repeat	HEAT, type 2	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR026825	Family	Vacuole morphology and inheritance protein 14	Interproscan
IPR021841	Domain	Vacuolar protein 14, C-terminal Fig4-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16023	TAX1 BINDING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000306	Cellular Component	obsolete extrinsic component of vacuolar membrane	Interproscan
GO:0006661	Biological Process	phosphatidylinositol biosynthetic process	Interproscan
GO:0010008	Cellular Component	endosome membrane	Interproscan
GO:0070772	Cellular Component	PAS complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15305	VAC14, TAX1BP2; vacuole morphology and inheritance protein 14	-	Human T-cell leukemia virus 1 infection	ko05166	deepkoala