Gene detail

Detailed information of ENSLDHP00000015673.1 in Eunicella cavolini

Genomic Location: chr14:15069786...15077709
NR annotation: XP_028395483.1, aconitate hydratase, mitochondrial-like [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000017039

ATGACCAAGAATGGCTGCTCAACTAGGTTATTCAGTGTGGCTTGCATAAACAATCAAAAGGTTGCAATGAGTCGATTAGAACCACACACAGACTTGAGTCACAACTACCAAGTACTAGATGAGAATCTTAAAGTTGTCCGTGAAAGGTTAAATCGACCTATGACTTTGTCTGAGAAGATCTTGTACAGTCACTTGGATGACCCCAAAACCCAGGACATTGAGCGAGGTGTGTCATATCTAAAATTGCGACCAGACAGAGTTGCTATGCAAGATGCTACTGCTCAAGTTAGTACTCTTGTTTGTGGTCTTGGTGGATTATGTATTGGTGTGGGTGGTGCTGATGCTGTTGACGTCATGGCCAACATACCCTGGGAGTTGAAATGTCCAAAGGTTATCGGTGTGAAACTAACTGGGAAATTAAGCGGTTGGACATCGCCCAAAGATGTGATTCTCAAAGTGGCAGACATTCTCACAGTGAAAGGTGGTACTGGTGCTATTGTTGAGTATCATGGTCCTGGCGTTGATTCCATCTCGTGCACAGGAATGGGAACAATCTGCAACATGGGGGCAGAGATCGGAGCGACGACTTCTGTGTTTCCGTTCAACTCGCGTATGGCTGATTATCTCAGGGCCACAGGTCGTGAAGACATCAGTGGCTTGGCTGAAAAATATATCCATATACTTGAGGCTGATGCAGGATGTGAATATGACGAAGTGATTGAGATCAATTTAGACGAGCTTGAGCCCTATGTGAACGGACCTTTTACACCAGATTTGGGCACGCCCATTTCCAAATTGGGTGAAGTTGCTGAAAAGAATGACTGGCCATTGGAAGTGAAAGTAGCGTTGATCGGCAGTTGTACAAACAGCAGCTATGAAGATATGACAAGATCAGCAAGTATTGCAAAACAGGCTTTGGATCACGGCGTTAAATCAAAATCGTTATTCACAGTCACTCCAGGATCAGAACAAATCCGAGCGACCATTGAACGAGATGCAGTGGTAAGGATATtgagaaaataTGATGGTGGGATCACAGGAAATGGTGGAAACATACAAGATATCAAGAAAGGCGATAAGAACACCATAGTTACTTCATACAATCGAAACTTCACGGGACGAAATGACGCTAACCCAGAGACACATGCATTTGTCGCTTCCCCAGAGGTAGGGAATGTTcatgtctttttatttttagGGGAAACATTCAAACTTGAAGATCCCAAAGGCGACGAACTTCCATCTCGTGGATTTGACCCAGGTGAAGATACATACCAGGATCCCCCAACTGATAACTCTGCCGTCAATGTTGATGTTGACCCAAACAGCAATCGTCTGCAACTGCTAGAACCTTTCGACGCCTGGGATGGCCAAGATCTCATGGAATTACCCATTTTGATCAAGATCGCTGGCAAGTGTACGACAGATCACATAAGAGCTGTGAATGAAGAGAATGGGGAAATTAATAATGTTCAGAATCAACTCACTATGGAATACGGTCCTGTACCTGACACAGCTAGATATTACAAGGCAAACGGCGTGAACTGGGTTGCGATTGGTGATGAGAATTACGGTGAGGGCAGCAGTCGAGAACATGCTGCCTTACAGCCCAGACATCTTGGTGGTAGAGCGGTCATTGTCAGAAGTTTTGCTCGAATTCATGAAACCAACCTCAAAAAGCAAGGCATGTTGCCTTTGACATTCAGCGACCCAAGTGATTATGATAAAATCAAACCAACAGACCGTATTTCATTGCTCGGTCTAAAAGAATTCGCCCCTGGAAAGGTAGGCTTATTTGAAATATTTCTACTAAACCACACGTTTAACCAGACGCAAATTGAATGGTTTAAGGCGGGCAGTGCACTTAATAACATgTCTATAATGGGTTTAAACATCAAACATTTTGAAGACGATAATATTGACTCGAAATTTATCTGCTCACATTGTCATGGGGTTTTTATCGATCCAGTATTGTGCAAATGTGGACATGTTTTATGTTGGGTTTGTTTTAAACGACGAAAGAAACGCAAATTGAACTGTCTCGTGTGTTCAGAAGAACTGGGTGTCTCGTCTGAGGCTTTGGAGGGAGAATGGTTGAAAGAATTAGGTGAATTAAAGATTATTTGTCCAAAAGGCTGCAAGGAGGTTTTTGTTTTTGAATGTTTGACTCAACATTTTGAGAACGAATGTGAATTTGCGCTGACTTCATGCACAAGCAAGGGGTGTAGTAAGAAAGTACGACGTACAGATTTGCCAGATCATTTAACAAAATGTGATTTTCGCATTGTTTCATGTTGCTGTGGGGTTGAGATACGATTTTTGGATCTGCGTCAGCATCAGCTTGCACAGAAATGTGTTGTGAAACAAAATCTACACATGATTGTACGAAAAAGACGAGAAATGGAGCAGGCAATCAGGGATCATAGATTGACCATGCAGAAACAGTGTTTTGAAGAGGAGTGCAAACAAAGACGAATGATCAAATCAAAACAAGGAAGTGTTAGATTGGCCACTGCTATGTCAGTCAGGTCTGAGCCAGGGTTAAGTTCTGTGGCTAAGGAGACAGGTGTGGCAAGGTCATCATCAAGTCACAGTGCACCTGGACCGCTACAGAGAACTGCATTGAGCTGTGGGCAATGTGGAAAGTTGTATTCTAGGAGCAATAACCATGAGAGAGCATGCATTTGGCATTTCGGGGTAAGTGACATTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99KI0	Aconitate hydratase, mitochondrial OS=Mus musculus OX=10090 GN=Aco2 PE=1 SV=1
Q9ER34	Aconitate hydratase, mitochondrial OS=Rattus norvegicus OX=10116 GN=Aco2 PE=1 SV=2
P20004	Aconitate hydratase, mitochondrial OS=Bos taurus OX=9913 GN=ACO2 PE=1 SV=4

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004434 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00330 all species →	Aconitase	Aconitase family (aconitate hydratase)	Family	Interproscan
PF00694 all species →	Aconitase_C	Aconitase C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001293 all species →	Domain	Zinc finger, TRAF-type	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR015931 all species →	Homologous_superfamily	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3	Interproscan
IPR001030 all species →	Domain	Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR015928 all species →	Homologous_superfamily	Aconitase/3-isopropylmalate dehydratase, swivel	Interproscan
IPR036008 all species →	Homologous_superfamily	Aconitase, iron-sulfur domain	Interproscan
IPR000573 all species →	Domain	Aconitase A/isopropylmalate dehydratase small subunit, swivel domain	Interproscan
IPR050926 all species →	Family	Aconitase/IPM Isomerase	Interproscan
IPR018136 all species →	Binding_site	Aconitase family, 4Fe-4S cluster binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43160 all species →	ACONITATE HYDRATASE B	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003994 all species →	Molecular Function	aconitate hydratase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006099 all species →	Biological Process	tricarboxylic acid cycle	Interproscan
GO:0051539 all species →	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000015673.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.