Gene detail

Detailed information of ENSLDHP00000016135.1 in Eunicella cavolini

Genomic Location: chr15:9820860...9835034
NR annotation: XP_028399778.1, rho GTPase-activating protein 39-like [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000017545

ATGGCAGAAAGAGTTGATTGGGTTGAGATTCGAGAACCCCGTTCTGGGGAGTTGATGTATGCAAACATCAAAACTGGAGAGTGTCTATGGGAAGCGCCCACTTCTGCCAACGTGAAAAAGACAAGCACTAATCAATGGTGGGAACTCTATGATGAAAAAACGAGACGATATTATTACTACAATGCTCATACCAAACAGACCGAATGGAGGAAACCAAAAGATTCGGACATTATAACATTAGCGAAACTACAGaatttaaaaaaaaagggcGAGTCAAGGGGGTCAAAGCGAAGATCAAGTTCGTCTAGAAAAGATGGCTCGCACCACCGTCGCTCCTCATCATCGCGAAAGGAAGGCGCCGAGTCACGAAATCTTCGCGATGGCGAACAATCTTTGCCGAGGAAATACAGTCGGCATAATTCGGGTGAGAGTCTGTCACATGCCAGGAAAAATAGTCGAAGTTCACATACAAGATCTTCTGAGAGTCAGGGACACTCATCCAAGGATGACCAGGGGATGGAACGTGATTCTAGGGGTGAAGAGGGGATGACGCAGGATGGTAAGAAGGATGAAGTGAGGGACGATGAAAGAGCACACTTTACGATTGAAGTGCATCGTTCGGAAAAAGATGACGGCACAGATATTCAGGATGTTCCAGAGCTCAACCATTCAAACCGCAGCTCTGACGTAAGCATGGACATGGAACCACCCCCCGATATGGACACGACCACACGAAATATCGAATACCTTAAAATCAGTGGTGAAGTAGCTGACGATGCAGAAAATTGTGTTGATGATGCTGATATTATTGCTGATGATGCAGAAATCTTGGAGACATCATTTGAAACGATAGTCCCCCCACCAGAAAGCTCATCAGGAAGGACTAGTAACTGCTCTATACATCAGTCCAACTATGTGAGCGATGGGCCTCTGTCGGAATCGGAGACATCGGCCCTTAATGATTCTTTCCACAGTTGTGATAGTAAAATAGTGGAATCGACTTCGGAGTTGGAGCTGATCGTGACGGGGGCAACTCCCCCCAAGGAGAGCTGTGGGGTGTTGGCGCCGGAAGAAATTCCAAGGACCACTTCGTTCTTTAATAAGATGGTAGACCAACAAGGAAATTTGAGGTCATTGAGTCCTGAGGAATGTTCAAAGAACGTAGAATGTCCTTCAAGTGACAGAAGCAACAATGGTCCACCACCAACAACTCCTGTATTTATACGTGGCGAGGGAGGCAGAAGGAGATCCAGCTCGCTAGATCCTAAAGCTTATGACAATCTGTCGTCTTCACCTCATCACTTCTCTACTTATGATAACATATCAGACAACTCTAGTGATGAAGACTCCATGTCGCTCAGTGAGAAGCTGATGTCAGGTGGCATGCCTTCGACGACCGCTACCCTTGTCGAAGACTGCGAGCCACAGGAATCGCCTAGCAACAACGAGACTCACGAAAGAAATTCGAGAACGTATCACCACCAATGCTCTGATAGCGTGCTCGAAATGAAAGAAAATGGCAACTTAGATAACCGACCAGAACGACCACCACAACCACTGAATCTTCGAGGAACAAAACTAATTGTTAGATCCAATACATGTCCAGTAAAAACTCCCAACAGTCCTATTACCCCACCACCAGTAGCAACAAAGAAGTTTACACAACTTGAATTGTCGGTACAACATCGTGGCTTGTTTGGCAAGAAGGATAATTTGATTGATATGCTTGCACACTCCAAGCAATCAATCAAGAAACCCGTTCTCAACACCCGTGATAAACAATTGAAAAAAGATGCCACTGATATGTTTAAATCTGTACTAGTGTACATGGGTGACAAGACGAACCGCAATAAAAATCCCGACGTCGCGTTGTGGGAAATTGTAACGAGAGCTTGGTCGAACCAACCACTTCGAGATGAACTTTACTTTCAACTTATCAAGCAGACCACTGATAATAGTTGCTCATCAAGCTTAGAGAAAGGATGGGAATTAATGGCAGTTTGCTTAGCAATGTTTCCTCCTTCTGCAAAATATCACAGCTACCTGGAAGGATATGTTTATAACCATCTCAAGGACAACCAGAAACCTGTGAATAAAATACTAGAATATGAGATCTCTAACCGTATAGGTCACTACGCAGAGAACTGTCAATACAAACTGGAAAAAATGGCCAAGACAGGCTCAAGGAAAGGGCAGCGGCAACCTACAATAGAAGAAGTTAAAGCTGCAAAGCGGGCCATATTTAATCCCTCGATGTTTGGCAGTACACTCGAGGACACGATGGAAATGCAGAGAGGGACGTTTCCTGAACGTAAACTACCTTGGATACTCACTTGCCTTACTGAACAAATTGTGCAACAAAATGGTACCTCGACCGAAGGAATATTTCGTGTTCCTGGTGATATCGACGAAGTCAACGCTCTCAAAGTAAAAACTGACAGTTGGGCCTACCCTGACGATTGCAACGACCCGAACGTTGCGGCCTCACTGTTGAAACAATGGTTCAGAGATCTTAAAGATCCACTGCTGGACGAGTCTGTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9C0H5	Rho GTPase-activating protein 39 OS=Homo sapiens OX=9606 GN=ARHGAP39 PE=1 SV=2
P59281	Rho GTPase-activating protein 39 OS=Mus musculus OX=10090 GN=Arhgap39 PE=1 SV=2
Q622K8	Unconventional myosin heavy chain 6 OS=Caenorhabditis briggsae OX=6238 GN=hum-6 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003516 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00784 all species →	MyTH4	MyTH4 domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000857 all species →	Domain	MyTH4 domain	Interproscan
IPR038185 all species →	Homologous_superfamily	MyTH4 domain superfamily	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45876 all species →	FI04035P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000016135.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.