Gene detail

Detailed information of ENSLDHP00000016826.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: XP_028416861.1, uncharacterized protein LOC114541076 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000018330

ATGatttcaaagtattttcaatttgCAATAGTTTTCCTGCTATTGAAAGGCGGGGCTTGTTTCTTTGTCAGATCATTGCCGTATTATACAGGAGGATGTATTAAAGACACAGGACAAATACAGTCAAACGGCAGTTGGGGAACTTTGTATTTCATGGGAATCTCGTTAGACGATGGCAGCTGTCTGCATCCAGCTGCTCAGTTTCGGTTTCTCAATAATGGCGCCATGTTGAACTTGGAAAGACAGGGATGTCTCGCTGCTTTTAATAAAAATACTTCTGGTTATAATCTCGATCTGTTTTATATTTACGTTGGCCCAGAAGCTGCTTGTGCTCAGAAGCCTAGCGAGGGTATCTATCGTGCCATAAACCAGACCGCAGAGGGAGGATTATCGGTTTATTATagacaaaatgaaaagaagccATTTGAAAAATGGTGTGCAATGAAAAGATATAAAAGAGAATTTGAGAAAAATTATGGAATAGATGGTATCATCGAACTGACGCAACAATGTCATTATAAGAATAATCGTAACAGCCGGAGATTTAATTTCGGTTCAGTCACGTGTTATGGTAATATGGTGAAGAATGCCAACTGTCCTAAAGATCAATTCATGGTGGTCAAGACTGCATCTTACCGTGGATTGCTTGGCTCAAAGACATGTGGGTTAAGCGATGAATATAGTTGTAATATTGATGTAACATGTGTTGTTAAGAAACAATGTGATGGTCTACACGAGTGTAACATGACTGTGGATGACAATTTGTTTTCTGGTGATCTATGTCCTAGATTATCAAACTATCTTTACTTTGAATACCAATGTGTTGACACTGTTGAAACTTACAAAGAACCTTGCGTTCACGATgtgtttttatcaaaatcatCTCTACCTTACGAAGGTGTTGTACAAATCGTTACTGGTAATGGAACGAAAAACGTTTGTTGGGAAAGTTTAAAGAACGACGCCAAGGATGTTGTTTGCAAATACCTGGGTTACCAATATGCACAGTCCCTAGTTAAGAAGCCTGCTCCGACGAAGGATAAAGGTGTAACATTTTCTGGAAGCATAGATTGTAATGATGGATTTCAAGagaaatatttatcacagtGTTCAATCAGAGCTTCGACCAGGGAAAATTGTTCTGAGATATCATACATACATTGCGTTAGTGcAGCTGACTCTCGGTCGAAGATTCTTAGACCACTGTTAGAAGATAAACGAAGATTTCCAAATTCATCATTTCATGCTACTTCTTCTTTATACGGTCACAGTGCCTCTGATGCAAGGGTATCTAGTGGTAGTTCATGGTGTAATTACTTCCCGTATTACAAATATTTCCTTCAAGTGGACTTAGGAAGACTGTATCGCCCTTATTACATCGTAACATATGGTGACAGCACCAGCCAAAAATGGGTGGCCTCATATAACCTGAATTACAGTGTTGATCTGGTCAGCTGGTCACCTGTACCCAGGGTGCTTCAAGGAAACAAAAATGCTCACCATGCTACCAGTGAATATTTTACATCTCAAATTAGAGCTTTACGATTCATTCCATTAACATACGTAGGTCGACCATGTATGAGAGTTGAGATTTATAGTTTAGTACCAGATAAACTACCAAAGCCCACGGTTACACAAATCACGCCTAGAAGTGCTGAAATATATTGGAAGTACAAATCTTATTATCCTCCACAGTCAAATTGGATTAAACTAGAGAAAAATGACACTCTACTCCGGACGATTAAGACAGAAAGAACTAGCTATAAAATAACGAGTCTCATTCCGTACACTACATATGAGATATCTGTAGCTGCTGAAAATGACTACGGTCTTGGTCAAGAGACTTTTACTTCGTTCTCAACAGCAGAAGAAGCTCCAGGCGGTCCTCCGTTAAATATCAAAGTCACATCAAGAACAGTGTCGTCATTGGCTTTCACCTGGGAATCTCCTGAGGAAAGTAAACAATATGGCGTCATTATCAGTTATACAGCGTGTGCGTCACATTTAGAAAATGGTCCTTGCTTTCTGAAAATTACCATTAGTGAAAGAGAGTGGCTCGTCGAAAACTTGAAACCATCAACCAGATATTATATTCGTATTCGTGCCAGTACTAAAGCTGGTCACGGACACTACAGTGAAAGTATGGGATTTTTTACGAGTGGACAAGCGGTAATGAGGGCCACAGCAGGAACTTCAACGACACTTACATTTTCATTTGAAATTCCGTCAACAGCGTTTGTGCATTTCTACGTGGTAGCTTTGAAGTTGAAAGACGGTATACAGCCTATATCATCCGACAGTTACGAGGACAGTGAGTTGGTGACGTATGCCGAGGCGAAAAGATCAACCAATCCGAAGCCTTATATCGCTGCAACAGTTCTATCCAGTAGTGTCGATGGAAACATGTTTGTTCTTGGTGATGAGAGAAATACAAGTGAACCAACAACACGAAAACGCAGATCAACTACAAGTGATTATTTTAATGGTCCGTTGGAGCCTGGTGCTAGCTATACTATATTCCAACGAGTTATTTTCAATTGCAAGGGTGATGACTATTACTCCACGGACTGGAGTCCTGCTTCAAAAACGAGTGAGGATACAGGTGGCCCCCGTTTGCTGACCAACATGTCAAGTGGTGATATAATAGCAAAAGAAGGTGATCTTGTCAGTCTCCTGTGCTCTGCTCAAGGTGAACCACCCGTTTCTTTCACTTGGGAAAAAGATCAGAAACCACTAGAAAGTTTTATGGAAAACGACAAGCCCCAACACAGTTCTTTACTTGCTGTGACACTGAAGGACCAAGCAAGTTTTGGGAAGTATATTTGTCACATACAAGATCGATTTCAAAGCACCACTCATACAGTTCGAGTCTCAAAAGTAAACCAAACAGTTTCAGGCGATGATGAGTTGAAaaaaaatgatgatgatgagtTGAAGgaaaatgatgatgatgagtTGAAGgaaaatgatgatgatggttcTCAAAAATATCGTGTTGGAATTATTGTGTTGGCAATTTTGCTGATTACTTCACTTGTTATTCTTGCTTATTTTATCTATCAAAATCGTCGACTCAAATCATCAAAAGAAAACGTGGAGAATACGACCAACGATACTCCTGGCACTGTCGGTGATTACGAGCAATTCGACAATGAACTGTCGACGCATGTAGCTGTCAAGACGCCTGTGCAGGACGAAGTACCCAAGGACGACGTAAACCAGGTGGAAACTGGAATTTAA

Transcript

Protein

Uniprot

Uniprot term	Description
Q9BMN8	Tyrosine-protein phosphatase Lar-like OS=Caenorhabditis elegans OX=6239 GN=ptp-3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02140	Gal_Lectin	Galactose binding lectin domain	Domain	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF00754	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00530	SRCR	Scavenger receptor cysteine-rich domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000922	Domain	D-galactoside/L-rhamnose binding SUEL lectin domain	Interproscan
IPR050379	Family	Type I Cytokine Receptor	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR001190	Domain	SRCR domain	Interproscan
IPR036772	Homologous_superfamily	SRCR-like domain superfamily	Interproscan
IPR000421	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR043159	Homologous_superfamily	D-galactoside/L-rhamnose binding SUEL lectin domain superfamily	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008979	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR017448	Domain	SRCR-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23036	CYTOKINE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0030246	Molecular Function	carbohydrate binding	Interproscan
GO:0004896	Molecular Function	cytokine receptor activity	Interproscan
GO:0009897	Cellular Component	external side of plasma membrane	Interproscan
GO:0019221	Biological Process	cytokine-mediated signaling pathway	Interproscan
GO:0019955	Molecular Function	cytokine binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan