Gene detail

Detailed information of ENSLDHP00000018355.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3988931.1, DNA annealing helicase and endonuclease ZRANB3, partial [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Sequence

CDS

ENSLDHT00000020082

ATGTGCGAAACACCGCGTTATAAAAGCCGCAGGAAATCGACGAACAAGAAGTGTTCTACGGATGAATTTGTAGCGCGAAAACAACGAGAAATTTTACAAACATGCTCAGGGGTTGACCAGAGGAAGTCCAGCAGTAAAAATGGTAGTAAGAGATCCAAAAGAGGCAGTAAGGGTTCAGTAACAGTATCACGGTGTACTGAGGAGTCTAAATGTATGGAAACAGGTGATAAAATGGGTTTATCGCCGGTAGCAAACGGTGGTGAACAGCTTATAGATTCCTCTTTGTCAGTGGACCATTCGAGCACAAACACTTCGGCCGAACATCGGTCAGAAAGCAAACCGGAGACACTGGTTAAACCTAAAATACTGGTTGAACCCGAAAAACCAGTTGAACCTGAAATACCTGTTAAACCTGAAATAGAGGTTACATCGGTAGAAACTTGCGAAATGAACACAAGTGATGTAGATTTATTCGCCCCTGCGCCACCAAATGAGGTGGTCTCGGACGATATTATGACGTCACCATGTGAGGATGAGATTATGACATCATCCTGCGAGGAAATTATGACGTCACCTTCCGCGACAGACACAGCGACCGAGAATCTTTTTGGAACTGAGTCCGAGTTTGATGACATCACGGACGATGATTGGTGGATGTGTACTTCATGTAAGAATTACAATTTCGACGATGGCGCTGACGAATGTGAAGCTTGCGGGATCAAGAAACCGAGCGATGGTTTTGAAGACCTGGTATCGGGTCTCGAAGATGACGACGATTGCTGGCAGTGCGAGGACTGTGGCGAGTTCAACTTCGGTGATGTTGTCATTCGGAAGTGTACGAAGTGTTGTCAAGGTGATAAGAAAAAGCGGAAGTCACTTGCTGAGCAGTATAAAGCATTACGTCATCTCATAGTCGATGATGAGGGATCCGATGGAAATACTGGGACACCAGATGTGGGAACTCAGGAACATTTTGTGAAATTAGAGGTTATAGAGAACCTAATGTTTCGCCTTAGCAGTTATACAGATCGAGTGTATCTGTACGATGGGaACGGAGATCCACTGAACTGCAATGTTAGTATTGTTGACATGGAAGGCTCGGAAACAGAAAATATCCCCGCCGTCTTAACTGAGCCGTCGAACAGGAAACAAATTTCGAGATTTGTGAGAAAATGGAAAAGCCTTCAACAGAGAAAACGCAGAATGATTAGAAAAGCTGGAATTATTTTTGACGATCCTTTCGAGGCACTGGAAGCGATCAAGATGGGTCATGAACAGAAAATATGTACAAGTCGCTTTCCATCCAAGGAGAAATTGCAAGCAGAAGTTCTCGACGCAGCAGAAGAGAAGAAAGGAACTGTACGACACTGTGTTAAACCCAAGGGACGAAAGACGGGAGGATGTTCGGTCGAAGAACGAAAGCAAGCGACAGAAACGAACGACAAACATACACGTTGGATACAAGCAGTTGATGAGGACGGCCGACCATTATGTTTGTCATGTAAGGGAGTAGTAGACACAAAGAACACTAACAGTTTGTGGGATGAAAGGTTTTGTTCGCACAAATGCAAAGAACATTATCAGTGTCGTATTAGTGGCACAAGGGTTCGTCAACAGCTGTTTCAGGATGAAAAAGGTGTCTGTCAAAAATGTGGCTGCGACGCTCATGAACTATATCGGACCATAAAACTTTTACCCAAAGCTGACCGACGATCTTATTTGGAGAACACACCGTTTATAACTCTACCTGTGACGCTGTTGAATAAAATTATAATCGACCCCAAAGAAGGCATGTTCTGGGAAGCGGATCACGTGGTAGCAGTGGTAGAAGGGGGTGGCGAGTGTGATCTGGAGAACTATAGGACATTATGTGTCCCGTGTCACCGTCAAGTTACGGCCGAGCTGCGCGAGAGGCTGAGAGCGAGTCGACGGAAACCAAGGATTGCTGGGATACCGGATATTACGTCATTCTTTAGTTCATGa

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6NZP1	DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus OX=10090 GN=Zranb3 PE=1 SV=1
E1BB03	DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus OX=9913 GN=ZRANB3 PE=3 SV=3
Q5FWF4	DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens OX=9606 GN=ZRANB3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001424 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01844 all species →	HNH	HNH endonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002711 all species →	Domain	HNH endonuclease	Interproscan
IPR003615 all species →	Domain	HNH nuclease	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45766 all species →	DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0004519 all species →	Molecular Function	endonuclease activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0031297 all species →	Biological Process	replication fork processing	Interproscan
GO:0048478 all species →	Biological Process	obsolete replication fork protection	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14960	CXXC1, SPP1, CPS40; COMPASS component SPP1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.