Gene detail

Detailed information of ENSLDHP00000021151.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: XP_022782228.1, uncharacterized protein LOC111323189 [Stylophora pistillata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000023089

GATGGAGACGGATTCAGATGGTGTATCAGCAGAGATCGAAAATATAGACAATATATTGGTCAAGCAGCTGGTAGTGCTTGTGCAACAGAATTCACAAAGAACAAATGGAGTGGTATACAAAACTCTGTTCTACTGTTAGCAGGAGATATTGCTTCAAATCCTGGCCCTATTAGATCTCCATGTCAGATATGTGGCAATTCAGTACGAAGAAGTGAGAAAGGATTAAACTGCATTTTATGTCGGGATTGGATCCATGTTCAATGTACGGCGTTATCTGAGGACGATTTTAATAAGCTCACTAATTGTGACTTGTTAGAATGGAGCTGTGATAAATGTAAAGAAACCTTGGTGAACGACGAAAATGTCTCAGTTTGTGAAGATATGTATGATAGCTTTAGAACAACACTTAAAGGTAAAGGGGTAAAAATAACTCATATAAATTGCTGTGGAGTAAGATCTAAACTAACGGAAATCATTTTGCTATTAAAAACATGTTCTATTGATATTCTGGGTATTACAGAATCACATCTCAACGAGAAAATTACAGATGATGAAATGTATATAGAAGGCTATCGATTTTTCAGGCAGGATAGACAACATAAAGCAGGCGGAGGCTGTTTGgtttattataaagaaaatttaaatgttattctaaAACCAGAATTTATGGTTAATAACATAGAAGCCTTGTGGATGGAAATAACAATAAACTCGCAACGGCTATTGATAGGAAATGTCTATCGCGCACCAGATAACAATGAATTTTATAATGAGTTTAAAAGAATTTTAGAACGATTGTGGCTCAAGCGTAACAATATGCTAATCATGGGTGATTTTAACTCAGATCTattgaaaacaaacaaagacAAATGTCATCAAGGAAAAAAACTAGAGCACATTATTAAAAGCTTTGGCTTAACTAATGTTATCAAAGAACCGACTAGAATCGCTAATTCATCAGCGACGTTGTTAGACTTAATTTTAGTGAGCAACGAATCGAAAATAACGAACGCAGGAACAATAGATCCAGCAATATCAGACCATAAAATGATTtttgctattgtgaatttaattAGGAAAAGAGAACATCCAATAATGAAAATAGTAAAGAATTACAAAAACGTAGATGAAAGTAAATTCAAAGAAGCATTGCGAAATGCCCCATGGTGGGTATGTAATCTATTCGACGACTTAGATGATGTGCAAAACGCCTGGGAATTGTTATATAAAAACGTTGTTGATGAGTTTATTACAGAGCGAAAAGTCAAAGTAAGACAAAACTCATTGCCGTGGGTTAATACGGAAATCAGAAAGCTATTAAGTGAGAGATTCAAACTCTTGAAAAATTGGCAGCAAACAAAAGATCCCACAGCACATAAGAAATATAAGGAAGCGAGAAATTTAGTAAATATACGGATGAGGAAAGCGGAAGCTGAGTATTGGAAAAGTGAATTTGATAACGTAAGTAACTCTAAAGAATTTTGGAAAGTAGTGAAGAAAGTCCATAGGAAAATGAAGGCAACAAAAATTGGACCACTTGAAGACGATCAAGGAAATATACAAACAAATGAGACAGTAAAAGctgaattaataaataattactttGCAACAGTTGGCGAACAGTTGGCGGAAGCATTTCCTGCACAAATAGAATCGGAACAGTTTGTATTAAGAATAACCCCATGCATTGAAGAGTTGAAAATCGACGATAAGTTACTCGTAAATCAACTTCAAACAATAAACCCCAACAAAGCATCCGGTCCAGATGACATAAAACCGAAAGATTTTAATATGGCTGGAGAAGCATTAATGGATGGCTTGCGTATTGTCTTCAATAAGTGTAAAAAAACGAGAAAAGTACCCCAAGCATGGAAAAGGGGAAAGTTAAAAGCTGCATTCAAGAAAGGTAACACAACAAAGCGATCAAATTATAGACCTTTGACCATGCTAAGTTTACCCagcaaaatgcttgaaaaacaTGTATTACAACAGGTAGATGAACATATCTACCAACATAATTTATCGAATGACAAACAGTGGGGCTACAAAAAAGGAAGATCGACCGAGTTGTTAATGTTAAACATAACAGAGCACTGGAAGATGGCACTTGACAGCGGTAAAGCACTTTGCAGAACATATTTACACGGACTGAGAGAACAGGAAGACGTAAACAGAATTTTAATGTGGTTAGGTGTAGAACTGAAAAGGGAAGGCCTTCCTTACGGTATAGAGGTCCTGTAG

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|PHD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019787	Domain	Zinc finger, PHD-finger	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33395	TRANSCRIPTASE, PUTATIVE-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007508	Biological Process	larval heart development	Interproscan
GO:0031012	Cellular Component	extracellular matrix	Interproscan
GO:0061343	Biological Process	cell adhesion involved in heart morphogenesis	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan