Gene detail

Detailed information of ENSLDHP00000022782.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: CAB3999273.1, Phthiocerol synthesis polyketide synthase type I [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000024720

ATGATAAAACATGCTCAATTTGTTCCGACCATCAACGTGCATGAAGTCAAGCCACAGCTCAAGATGTCCGACAGGAGAATGATGGTTCAACTTTGTAATGAGCCTTGGAATACCGAAGATGGCAAACCAAGAACTGCTGCAGTTTCTTCGTATGGCTTTGGTGGAACGAACGCTCATGTAATCGTCAGGGAAGTTGCCAGAAACCCTGTGACCGTAATGCCGGGAAGACGTATATCTAATAGAGTAATGACGTTGTCAGCTGCTTCAAAAGATGCATTAAGAGCAATGGCCAAGAAAGTATCGCAGTCATTTAAGACAAAACCAGATGATGACGAGCTTCTTAAAGACAACATTTGCTATTCACTGAACGAGAGGTACACAGTGCATTCCCATCGTTTGGCGGTTAGCTTTTCTTCGTTTAAACATGCCGCAAGGGCTGTAGAGATCTTCGCTGATCAAGAAACTGGATGGGAAGAATTAGTGGCTTACGGTGATGTAAACAAAGCGCGTAATAAGGTCGTCTTCCTCTATGGTGGTCAAGGCGTTCAGTGGTATGGAATGGCAAGAGAAATGTTGATTCAAGAGCCAACGTTTAAAGAAAGCATTGAAAAGATTGATGCATTACTTAAACGATACAATATTTCATGGTCCTTAATTTCTGAGCTTGAAAGATCTGAGGAAACTTCCCGCCTTCATGAAAACCCCATTGGACAGACAGCCTTGTTTGCAATACATTTTGCCTTAACTGAATTACTCGAAGCTTGGGGCGTCACACCGTCTGCTGTTATTGGACACAGTCTGGGAGAAATATCGGCAGCATGGGCATCCGGGGCGTTACGTTTACATAAAGCCTTGCAATTGGTTTTATTCCGATCTCATCTTCACGAGAAATGTTCACCTACAGGTTGTATGGCTGCCATTGGGCTTTCAGAAGAGGATGCACGAAGTATGTTGGAAGACCTTCGGTTGGAAAATGAAGTTGATATCGCGGCGGTCAATAGTCCAGGGAACGTGGTGTTATCTGGTGGTAAAGTTTCAATGGAGCTTGTTGAAAATCATGTCATCAGTTCACGAAGCGATGTATTCTGGAGGAAACTTACTACGACACGGGCATACCACAGTCGAGAGATGGAAGAAATAAAGCAATCATACTTCAAACTTACAAGTGATTTTAATGTACGTCAGACGCAGAGTAATATACCATTTTACTCAACAGTTACGGGTGCCCAGTTATCTGGCCAGCTTCTTTCGCTCGAACACTGGTGGCAAAATATCCGCCAAGGTGTTTTACTAGAGCCTGCATTGAAAACAATGTTTTCCGATGATTATCACTTCTTTATTGAAATCAACGCTGCTCCTCAGCTTTCATACCATATTAGTCGCACATGGTCCCACAATAAAACGCCACAATCCCTAAGCGCAAACGATGCCGTAGTGGTTCAAACCCTACCAAAACGTTCAGCCACTCAACAACACTTGTCCTTTCTTCAAAACTGTGTTGCTCAACTTTTCACAAATGGCGTCCAATTATCCTGGAGTAAAGTGCAAGGCTCTGGATCGAAATCATTTATTCCTCGTCCAACGTATCCATGGCAAGAAACTGAGTTTTGGTACCGCAGTAAGCCTCCGCTTGAATTCGTTACATTCTTGGATGAGcaaaaaaacacagaaaatgaAGGAATCGTCGTTTTTCATCCCCTTCTTGGAAAAGCTGTTCCTACAGAAACGTTTACCGGTCTACATGCATGGGAATCTGAAATCAATTTGCACAGTGTTTCATACATTGGCGATCACAAATTTTCTGAATCCACTGACCCAGTGATACCAGCAGCAGTTTATGTAGAGATGGTATTAGCAATGGCACTGCATTTGTCCCCAAACACAGCACCTGATGTACAAAACATCACCTTCGATCATCTGTTGACCATATCCAATAACGACTCGCACAGAATAAGATCACGTCTCTTGCCCGAAGAACGCCCTGGTGAGAAAAACCGGTTTCAGATTACAATTGTGAATGTAAACGAGATTGAAGTGGTTCTCTCTGAAGGCGTCTTACAACTGGGCGTTAACGATAGGCATGGAAGTGAAGgAGCATCCCAACAAGGAAACCCCAACGatgttgaaattttcaaatccgCAATGATTAAATTGTCGAATGATTACCTTGAAAAGGAACGTCAAAACAAGGGGTTTGAATTCGGCCCTCAGTTTGATTTGATAAAGGACGTATGGACTAACGGCACTGAATTCCTTGTTCTCATTTGTCCAACCGAAGATATCATTAATGACGCATCAGCTTATGTCATACATCCTTCAATAATTGATGCGTGTTTCCAGACAATGCTTCTGGTCAAAGGTGTCGAAGGACGATTTGTGCCGAAGGAGATCACACGTGTCACGATCCTGCAAAAACCTATTTGCATAGAACAGTTTTATGCCCACACAAAGTTCTTAGAATCAGAGAACACACCAACTTGCAACATTACCCTAATGGATAGTTATGCTAGACCTGTAATGATTATAGAGAAATATACCACAGAGGAAATTTCAACAGATAAGACCAAAGTGACTTATGAGAACTCATCATTCACTTTCAGTTGGGAGCAGTTAACGCCCGAAACCCCAGCAGCAAATCAAGTAAACGTTTGGCTTATCCTTAAAGATCAAAATACGTTTGCTGAACGGTTTTCACAGCATGTCGCAGATAGTAAAAATGTGTATTTGTTTGATAAAACACCTGCCGAATTTTCTGAAGTGCTAGATGAAATATCTAGCAAAATGAAGGGCGATGAAAGGTTGCTAGTGATCAACTTCTGGCCGGTGGATTGCTGCAAATATGATGCCGATATGCACAACTTTGACGCTACTCACGAGCTAGCATTTGAAAGTTGTCTGTTGATCTCACaagaaattctgaaaaaagAAGCTTTGTCCAAGAATACTCAGCTCGTCTTTGTCACTTCAGGAGTAGTTACCATTCCTGAACAAGATCGTTATCCTACCATTGATACTGCAGACACGTTTCCATGGTCTGCTTCAGTGTTTGGTTTCAGGAGAACCATGTCAGAAGAAATTACTACACCAAAGGCGTCTGTGGTTGATTTGCCTCCTAATCCAATCAATGACGATTTCCATAACATGGTGGAAGATCTAAGAAATCCAACGATGGAAGAAGAAGTTGTGTATAGAAATGGCGTGCGTTATGCTAATCGCATTAGGGAGTTGGATCCCGGCGAAGAAAATTTTACCAAACAGACGTCTCCTTTCACCAAAGGTGGGGAACGAAAACCTTTCAAAATGACAAGCATGTCAGGACAGTGGTTCCTTCGGGAAACATCGAATGAGagaataaaagaaaaaaatcgaaTCGAAGTCATCTACGCCAGTCCAGTCCTTCAGAAGCCTTGGCAAGATCTTGAAGCGAACGATCGCATTGCTTTTGCAGGAAAGATATGTGATGGGTACGAAGAAACACAAGTTCCTCTCGTGGCTGGATTTTGCAAAATTGACGACCTCGGAAGTTACGTTAAAGCAGATAAATGCTGTTTCACAGACATAAATTCCGACTTTACTGCTCAGCAAGCTGCTTCACTTACTTTTCCACTAGCAATATGTCCtatcatatttttgtaa

Transcript

Protein

Uniprot

Uniprot term	Description
A0A1B4XBH3	Highly reducing polyketide synthase sdnO OS=Sordaria araneosa OX=573841 GN=sdnO PE=3 SV=1
E0D203	Polyketide synthase GfsB OS=Streptomyces halstedii OX=1944 GN=gfsB PE=1 SV=1
P9WET4	Highly reducing polyketide synthase Preu5 OS=Preussia isomera OX=325670 GN=Preu5 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21089	PKS_DH_N	Polyketide synthase dehydratase domain	Domain	Interproscan
PF16197	KAsynt_C_assoc	Ketoacyl-synthetase C-terminal extension	Family	Interproscan
PF14765	PS-DH	Polyketide synthase dehydratase N-terminal domain	Domain	Interproscan
PF00698	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001227	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR014043	Domain	Acyl transferase	Interproscan
IPR049552	Domain	Polyketide synthase, dehydratase domain, N-terminal	Interproscan
IPR049900	Domain	Polyketide/metazoan fatty acid synthase, dehydratase domain	Interproscan
IPR032821	Domain	Polyketide synthase, C-terminal extension	Interproscan
IPR016036	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR042104	Homologous_superfamily	Polyketide synthase, dehydratase domain superfamily	Interproscan
IPR020807	Domain	Polyketide synthase, dehydratase domain	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR049551	Domain	Polyketide synthase, dehydratase domain, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43775	FATTY ACID SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan