Gene detail

Detailed information of ENSLDHP00000023181.1 in Eunicella cavolini

Genomic Location: chr2:67416233...67482785
NR annotation: CAB3985600.1, Hypothetical predicted protein [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000025120

ATGATTCACGATTGCCATCTGTCACCAGAACAAGAAATGAATTATATGAGTATATACACTGCAGGCGAACCTCTAAAACTTGTGAACAGCTTTCGTAGACGTCATACTTCTGATGCTTTGAAGTTACTTAAAGATCTTTGGCACGAATTAGAAACGAGATTTGGCAACGTCGCGATAATAACGAACGAGCTGCTCAAACGTCTGAGACAATCAGCTAAGTTCGAGGATCACAACCGAAAGAAATTACAAGCTTTCGCAGACCTATGCGCTGACATTGTATCACAAATGGCTGAATTACCTGGTTTGGCCTGTTTGAACTATCCTAATGTGTTACAGCCAATGTTCAGAAACTTACCCACATCAATCTGTTCCAAATGGGAAGAAAGAGTTGTTGAGTACGCATCAAAAAACAATGACGAGTACCCAGAATTTAACGAATTTGCTTCTTTCATCAAGAAACGAAAAGAAGAAGACAGCGCTAAGAAACACTGTCCCTTTCACGATTTAGACGGTCATGGTTTGCCAGAATGTAAAGCCTTTTCTCATAAGACTCTGCAAGAATGGATTGATTGGATGAAGCGAGCAGGCTTATGCTTTCTCTGTTCAATGAAAGgccatctttcaaaagaatgcAAGCAGGAAGTTATATCGAACAAGATAGTTCTCCTTGATATATTTCATCCTGATAATGCACAAAACACTGTGAGAACCTATGCAGTGATAGATGAACAAAGCAATGCGTCCATGATTTCACCAGTTCTTCTGGAAAAGCTTGGGATTTCAGGAGAAAAGCAGAAGTACTACTTATCGACTTGTAGTGGCGCTCGTGAAATGAAATTTGGTTACAGGGCTTCAGGTCTGTTCGTTAAGAATCTGAAGGGATGCAAGTTCAAATTGCCTACCTTGGTCAAATGTGACAACATTCCCAGCGATAAAATTTGTTTGAATCGTCATGGTGGTCCCGTGGATCCTACCAAAACGAAAGATCCACGTCAATCCGAGCAGTTAATGAAGGAAGCATACGACAATATTGAGAGAACAGTCGCCGATATTTTTCACCTAACCGAACACGATAACGAAACCAGCTTATCCGTTGAAGACCGCTGTTTCGAAGAGATGATGAAAGATGGGACACACAAGAACGACAAGAGCAACTGGGAGATGCCTCTACCTCTCCGATCAAACCACATCCTTTTTCCCAGTAATAAAGATCAAGCCTTTTCACGCTTGAAGAATTTGTTGTCAACCCTAAGAAAGAAACCAGAAATGTCGAGACACTACTTCGAATTTATGGGTAAACTATTCGCGAAAGGACATGCTGTCCGAGTGAAGACATCTAAAGATCATAAAGAAGACAAGACTACTAAGGAGAATGGCAATGTATGGTACTTGCCACATTTCGGTGTTTATCCTCCTCAAAAGCTGAAAAAGATCAGAGTGGTAGTCAAGAATGGACAAGCAGATATTAAGAATGTCGTAAGTAAGGATGTTAATGAAGTAGAAGCGTTAAAAGGTAAGTCAGACAAAAAGTATAGTTTACCAGAAACGGTAATCATAGATGAAGATAAAGTAAGTAATAAAGTACAGGAGGTTATCGAAGAAGTTACTAGCGAAGTCAATGTAAGTATACAGGGTGTCATTGAAGAGGCGACTAGCGAAAACAGCGTGACTATTTCTGCTGGAAAGAGAAAATACTCGGAGGAAATAGACTCGTATTGTATAAAATCTCCTACTAGGGTGAAAAGGCAAGTGGATGATCTTAAAAAGAAAGTTAAGAGTCTGCAGAAGAGATTGAAATCATCTCAGCAGAAGACCAGGAGAATGAACAAAAAGGTTAACAACTTTTTCTGGAGCATCAACGACGACTCGCTGCCCGAAGCGACGGATGTTCTTGTTTTTATGGCGGTGGCGGTGAACGGCAGTTGGAAAGTACCATGCGGGTATTTTCTCGTCAATGGTCTTACTGGACAGGAGAAAGCCAACTTGACGAAAGAATGCATAACCAAGTTGCATGAAGTAGGGGTGAAGGTGGTCTCTTTCACATGCGATGGCCCTACGTCCCACCAGTCGATGTTGAAGTTGCTCGGCGCTCAGCTGTTACCTGGTAACTTGCAGGCGTACTTCCAACATCCGTGTGACCCAAAGGCCAAGATCTACATTTTCCTAGATGCTTGTCACATGATAAAGTTGGTAAGGAACACCATGTCGGATTGGAAGGTCCTAAAGGATAAAGATGGCAATGCTATCAAGTGGCAATTCGTAGAGGAATTGCACAAGTTGCAAGAATCCGAGGGTTTACATCTTGCGAACAAGAAAACAGGTTTTCTTGGCTTCCTTTTGTGTATTGATGCTGTCGTGGGATTAGCAGAAGATCTCGTGAATGTCGAGAATCCTGTCCTTAAGTATCTGCTGACGTACAAGATGAGCCAAGATCACTTGGAATTATTCTTCGGGGCAGTAAGAGCGTCAGGAGGGTGGAATAATAATCCCACAACTCGCCAATTCATAGCAGCGTACGAGCAACTGCTGATGAGACACAATATCGAAGGAGGACACCAGTGTGAAATTGACTCGCAACCCACCGGAATATCGGATGTGGCAATTGCAAGAAGATATGACTTGGAGTTGAGACAGCCTGCTGCAACTGATCACGACTACTGTGATGTTTCTAACGCGATAGAACTATCTGAGTACAAAGAGGCAGCAGTATCGTATATTGCTGGGTATGTGGTGAAGATGGTGGTAAAAAAGATCCACTGCCCACAATGTACAGCGGCATTGACCACGACCAAAGAAAGCATTCCAGACCTGTTCGTTACATGGAAGTCGAATGGAGGTCTTAAATTGCCATCGCTGGGGCTTGTCAAAATCTGCCAAGAGACAGAGAAGTGTGTAATGAGAATGCTCAATGTAAATGCAGGTGGTTTACCACATGGTGCTGGACTGTCAAATGCGATTGCTAAGACGGTGTTGCAAGTCTGTGTCGAGAATGGGGTCTTCAGTACATTGGACCAACACATGTTCGATTCGACTGCAGTGAATAACCACATTTTTACTCTGATTAAGTGCTGTTCGCAGAGTTACGTGACGATTCGTATgcaccatttgagcaaaatgaGAAATGCAGGAATGCATGACAAGGTAATACGGAAACAATTTTCGAAGCTTGTGTTATTCAATCATCAGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H5L6	DNA transposase THAP9 OS=Homo sapiens OX=9606 GN=THAP9 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000414 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21787 all species →	TNP-like_RNaseH_N	TNP-like, RNase H N-terminal domain	Domain	Interproscan
PF21788 all species →	TNP-like_GBD	TNP-like, GTP-binding insertion domain	Domain	Interproscan
PF21789 all species →	TNP-like_RNaseH_C	TNP-like, RNase H C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR048365 all species →	Domain	Transposable element P transposase-like, RNase H domain, N-terminal	Interproscan
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR048366 all species →	Domain	Transposable element P transposase-like, GTP-binding insertion domain	Interproscan
IPR048367 all species →	Domain	Transposable element P transposase-like, RNase H, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47331 all species →	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23209	THAP9; DNA transposase THAP9	EC:2.7.7.-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.