Gene detail

Detailed information of ENSLDHP00000024625.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3977029.1, Hypothetical predicted protein [Paramuricea clavata]
Species abbreviation ECAVO · all data for this species · gene families

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P32780	General transcription factor IIH subunit 1 OS=Homo sapiens OX=9606 GN=GTF2H1 PE=1 SV=1
Q9DBA9	General transcription factor IIH subunit 1 OS=Mus musculus OX=10090 GN=Gtf2h1 PE=1 SV=2
Q960E8	General transcription factor IIH subunit 1 OS=Drosophila melanogaster OX=7227 GN=Tfb1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004796 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03909 all species →	BSD	BSD domain	Domain	Interproscan
PF08567 all species →	PH_TFIIH	TFIIH p62 subunit, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005607 all species →	Domain	BSD domain	Interproscan
IPR013876 all species →	Domain	TFIIH p62 subunit, N-terminal	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR035925 all species →	Homologous_superfamily	BSD domain superfamily	Interproscan
IPR027079 all species →	Family	TFIIH subunit Tfb1/GTF2H1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12856 all species →	TRANSCRIPTION INITIATION FACTOR IIH-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000439 all species →	Cellular Component	transcription factor TFIIH core complex	Interproscan
GO:0005675 all species →	Cellular Component	transcription factor TFIIH holo complex	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0006360 all species →	Biological Process	transcription by RNA polymerase I	Interproscan
GO:0006366 all species →	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0070816 all species →	Biological Process	obsolete phosphorylation of RNA polymerase II C-terminal domain	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000024625.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.