Genomic Location: chr3:46336243...46348463
NR annotation: XP_046846730.1, histone acetyltransferase type B catalytic subunit-like [Xenia sp. Carnegie-2017]
Species Eunicella cavolini · all data for this species · gene families
| CDS |
| ENSLDHT00000028736 |
| Protein |
| ENSLDHP00000026542.1 |
| UniProt accession | Description |
|---|---|
| O14929 | Histone acetyltransferase type B catalytic subunit OS=Homo sapiens OX=9606 GN=HAT1 PE=1 SV=2 |
| Q5M939 | Histone acetyltransferase type B catalytic subunit OS=Rattus norvegicus OX=10116 GN=Hat1 PE=2 SV=1 |
| Q8BY71 | Histone acetyltransferase type B catalytic subunit OS=Mus musculus OX=10090 GN=Hat1 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0004509 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF10394 all species → | Hat1_N | Histone acetyl transferase HAT1 N-terminus | Domain | Interproscan |
| PF21183 all species → | HAT1_C | Histone acetyltransferase type B catalytic subunit, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR019467 all species → | Domain | Histone acetyl transferase HAT1 N-terminal | Interproscan |
| IPR017380 all species → | Family | Histone acetyltransferase type B, catalytic subunit | Interproscan |
| IPR048776 all species → | Domain | Histone acetyltransferase type B catalytic subunit, C-terminal | Interproscan |
| IPR037113 all species → | Homologous_superfamily | Histone acetyl transferase 1, N-terminal domain superfamily | Interproscan |
| IPR016181 all species → | Homologous_superfamily | Acyl-CoA N-acyltransferase | Interproscan |
| IPR013523 all species → | Homologous_superfamily | Histone acetyltransferase HAT1, C-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR12046 all species → | HISTONE ACETYLTRANSFERASE TYPE B CATALYTIC SUBUNIT | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0006325 all species → | Biological Process | chromatin organization | Interproscan |
| GO:0004402 all species → | Molecular Function | histone acetyltransferase activity | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
| GO:0010485 all species → | Molecular Function | histone H4 acetyltransferase activity | Interproscan |
| GO:0031509 all species → | Biological Process | subtelomeric heterochromatin formation | Interproscan |
| GO:0042393 all species → | Molecular Function | histone binding | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K11303 | HAT1, KAT1; histone acetyltransferase 1 | EC:2.3.1.48 | Chromosome and associated proteins | ko03036 | deepkoala |
Genes whose expression across the transcriptome samples of Eunicella cavolini tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Eunicella cavolini, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
