Gene detail

Detailed information of ENSLDHP00000026652.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: XP_028403632.1, structural maintenance of chromosomes protein 2-like [Dendronephthya gigantea]
Species abbreviation ECAVO · all data for this species · gene families

Sequence

CDS

ENSLDHT00000028862

ATGCTTCCAGTGCGAGCCAGCAATCTTCAAGAGTTGGTGTATAAAGCTGGTCAAGCTGGTGTTACCAAGGCAACAGTAACAATAACATTTGATAATTCTGATAAAAAACAAAGTccagttggatatgaaactTTTGATGAGATTACTGTGTCAAGACAGGTTGTTATTGGTGGCCGAAATAAATATCTGATAAATGGCTGCAATGCAAACAACACAAGAGTTCAAGATCTATTCCGATCTGTACAACTGAATGTAAACAATCCTCATTTTCTCATCATGCAAGGAAGAATAACAAAAGTCTTAAACATGAAACCTCCTGAGATTCTTTCTATGATTGAAGAAGCTGCCGGTACAAGGATGTATGAGAGCAAGAAACTTTCTGCTCAGAAAACGATCGAGAAAAAGGAAACGAAACTAAAAGAAATTGAAACTATTTTGAATGAAGAAATTACACCAACTTTAAAAAAGCTAAAAGAGGAACGatcttcatatttggattatcAAAAAACAGTGAGAGAACTGGAGCATCTTTCAAGGCTGTATATCGCGTATCAATTTGTTCAAGCAGAGGAAATGCAGAAGAAATCTGTAAGTGAATATGATGAAATGGCAAATCTCATTAAAAGTTTGAAAGAAAAGTCTGTTCAGATTGAGGAGCAGATTAAAGTCCTTAATGCTGAGATAGCAGAGTTGGAGAGGAAGAGACATGAGgaATCAGGTGAAGTGATAAAAAATCTGGAAAATAAAGTCAATGAGCTTTCAAAGGTGGACGTTAAAGCAAACTCAGATGTAAAACATGCGAAAAGTCAACTGGCAGcggaaaacaaaaagaaaaaaacattaGAAAAAAGTTTAACTGATGATCAAAACCAGTTGACATCAAAAGAATCAGAAATGAAGAAGATGTCGGATATTCTAGTGGAACTACAAAAGAAAAGCGAAGAAGATGTAAAACGTGTGAAAAATGCGCAAGATCATTTTCATGCTGTGTCAGCAGGATTGTCAAGTAATGATGATGGAGAAGATCAGACCTTAGCTGATCAGCTGCTTGGCTGCAAAAATGATATTAGTAATGCTGAAACTGAATTGAAGCAAGCAAAAATGAAAGCAAAACACGCTCAAACAGAACTGAAGAAGAAGCAGAGTGAATTAAAGAAGACGGAGAAGGATTACAGCAAAGACAAAGTGTTGTTTGATGACATTCAAAAGAACATCAAGAAACTCGAGACTGAGATGAACAAACTAAATTATAAAGATGGACAGGAGGAAGGTCTGACTCAAAGAAAGCGTGAACTTGAAGCTGAAGTTGCCGAACTGCGCACAAAAACGGAAATGCTTGAAGCCAGATTTCCAAATTTACAGTTTCAATATAAAGATCCCGAACCAAATTTTGACAAACGAAAGgtgaaaggtttagttgCACAGTTAATCAAAGTAAAAGATGTATCAACTGCTACAGCTCTTGAAGTCGCAGCAGGAAATAAGtTATACAATGTCGTGGTGGATACCCAGGATACTGGAAAGAAATTGCTTCAGAAAGGACAACTAAAACGACGTTACACGATCATACCATTGAATAAGATTTCCAGCAGGAAAATTAACCCTGATACAATAAAGAAAGCGAAATCTTTGGTTGGTGATGAAAGTGTTAACCTTGCATTGTCATTGGTTGGTTATGAGAAAGATGTTGAAGCTGCAATGTCGTATGTTTTCGGAGGTAGCTTTGTGTGTGACTCACAAGATAATGCTAAAGCGGTAACATTCAATCCCAACGTTCGTACTCGATGTGTAACACTGGATGGTGACAGTTTTGATCCTGCCGGAACTTTGACTGGAGGTGCCCGTTCAAATAATACATCTATCTTAGCGAAACTTCAAGAATTAAACACGGCATCAGAAGCTTTTTCCAAGAAATCTAATGAATTAGAACAAGTTTTGAAAGAACTTGAAGATTGCAAGAAGGTCGCTGAACGGTTCCGAAAGTTAAAGCAACAATATGACTTGAAAATTAAAGAAGCCGAACTAATTGAGTCCAAGTTAAAACAAAGTACGCATCATCATCAACTGGAAGAAGTGAATGCTCTTCAGAAGACTGTTGAGGAACAAGAAAATATTGAGAAGAAGGCTAAAAAGACAATCGAGACTGCCACTGCCAAGTGTACGAATATTGAAGAGAAAATGAAGGAGGCTAAAACTCACCGGGAGAAAGAACTGAAGAAAGCCGAAGAAGATTTAAATAAGATAAAGAAAAAGGCTGAAGAGTCCAGTAAGGATATGAAAGATAAGGAACAGAAAGTTGAAGAGTTGAAGCTCGAAATTGAAGAAATAAAGTCAGAAGTTACAAATGTTGAACAACAGATTGCCAGCACAGATGAAGTTATTACCGGGTTAGAAAAGCAAATTGAAGAGCTGTTAGGAATTGCTGAAAATTCAAAGaaaGCATGTCGTGAAGCAGAAGAAAACCTGaaggaacaaaagaaaacacTGCGAGCTTGTAACGAGgCAATTAATACGAAAATCTCAAAcagaaaagaaagagaaaatgaaaacaatgatAATATGATCAAGGTGAAAGAGTTGGATCATAAAATGGTGAAATTTCAAAAAGACAGTAAAGATGCAGCGCATAAGGTTGAGAGAATGCTTGCTGAATACGAGTGGATTGACACTGAAAGACAGTTCTTTGGTCAACCTAACACAGCTTATGACTTTGCTGCTAATGATATGTCAGACGTTTCAAGAAGGTTAGCCAAATTACAGGAAACAAAAGATAAATTGGGTAAAAATGTCAATATGAGAGCAATGAATATGTTGGGAAAAGCTGAAGAGAAATATAACGACTTAATGAAGAAAAAGGCTATTGTAGAGAACGACAAAGCAAAGATTGAACAAGTTATTGCTGAACTCGATGAAAAGAAAAATGAAGCGTTAAAGAAAGCTTTTGAAAAAGTTAACATCGATTTTGGATCAATATTCTCTACACTACTCCCTGGTACATCAGCTAAACTAGCTCCACCTGAAGGGCAAACCGTGCTTGACGGACTGGAAGTAAAAGTTGCTTTTGGTTCTGTTTGGAAAGAAAGTCTAGGAGAGCTCAGTGGAGGGCAGAGGCAAGTTTCTATGTTGATTCATGGAAGAATATTGTTTTATCACCTATCACGTACCAAAACGGATACTACTCAGTCCTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O95347	Structural maintenance of chromosomes protein 2 OS=Homo sapiens OX=9606 GN=SMC2 PE=1 SV=2
Q8CG48	Structural maintenance of chromosomes protein 2 OS=Mus musculus OX=10090 GN=Smc2 PE=1 SV=2
Q90988	Structural maintenance of chromosomes protein 2 OS=Gallus gallus OX=9031 GN=SMC2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004136 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06470 all species →	SMC_hinge	SMC proteins Flexible Hinge Domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010935 all species →	Domain	SMCs flexible hinge	Interproscan
IPR036277 all species →	Homologous_superfamily	SMCs flexible hinge superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR024704 all species →	Family	Structural maintenance of chromosomes protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43977 all species →	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0051276 all species →	Biological Process	chromosome organization	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000026652.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.