Gene detail

Detailed information of ENSLDHP00000028245.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3986381.1, zinc finger 208-like [Paramuricea clavata]
Species abbreviation ECAVO · all data for this species · gene families

Sequence

CDS

ENSLDHT00000030554

ATGGAAGAAATTCCAGTGGAAtataatatcattatcgaggcGTTAAGTTGTGCTGTACAGAACCAGCAACAAGCTGAAGTGAACGAAGGTCAGGCAAATTTTGAATTTGTtgttataaataacactagcgACGAGCAAGGCCAAACCACGTTAGATTGTATAGAGCAATCACCGCATGAAGACGAACATCTCGCAACTCAAGTTACTTTCCAAAGCGCTGATAACACATCTGCAAGTTCTAATGATGCTGCTGGTACCGAAGGACAAGATCCAGAATCAACACAAGCAACTGAAGCAATTCGGCCAAGAGAGAAAAATCataaatgtgatgtttgcaacaagaCGTTTTTACATGCAGGTTCATTAAGACGGCATGCCAAAAGTCATGAAGAGAGGACGCGATATGACTGTACTGAATGTGACAAGTCTTTCAATCAACTGGGAAACTTACTGAGACACCAGAGGAATCATACGCGAGACAATCTTTACAAATGCATGCATTGCGACAGGACATTCCCCAGAATGGAAGCAATGAAGATGCACCAGAAATCCCATTCTGATGAGAAGACAGATACTCAGGCATGTTCTACAATAAACATTAGTGGCGTGCGAGAACTTAGCTGTCACGTTTGTGGTCAAGAGTTTGAGAAAATATCATTGCTGAAGAAACACTTGAAATCACACGAAGGATTGAAAGTTAAAGCGTTTCGATGTGACGTGTGTGAGAAATCGTTTGAAGTGGAGAGTGCATGTACCGTACATAAACGTACTCATACTGGGGAAAAACCGCATGCGTGCGACCAATGTGACaggaggttttcacaaatgggAAACTTGAACCGCCATAAAATCACCCATACGGATGTAAAACCTTTCCGATGTGAAACATGCGAAAAGACATTCAACAGAATGGACCTTCTCAAGACCCACAAGAAAATCCATGCTATGGTAGAACGTGGATTTCCGTGTAACTTATGTGCCGAGGTATTCTCTCTCAAGAACGATTTGAAATCTCATAAGAAAATTGTTCATCCAGTTCTACGTTGCAAGACATGTAAGTCGAAATTTTCCGATGCGGTGCAGTTTGATAAGCATTTAAAAAATCACCGCAGGGATAACCCGTTTAAGTGTAATATTTGTGACATGTGTTATTCTGATGCGCAGAGTTTAGTGAATCATATAGCAGGCCATGCTAAGAAGGAACACAAGTGTGAAATATGTGGTAGAATTTTTGGTCAGTTAGGGTCGATGAAACAACACGTGAGAAAGCACACAGGAGAACGCCCTTACGCGTGTGATGTTTGTGGCATGAGTTTTAGCCAAGTTGGAAACATGCGTAGACATAAGGATAACCATACTGATATCAGACCTTATCAATGTTCATTCTGTCCAAAGACATTTAAACGCAAGGATTTAATGAAAACTCACGAGCAAGTGCATTTACCTAAAAGTTCCCGAGGTaaaaaacgaaagatttttgatGGTGAAACACTAAGCCAACCTCGTCAAGCCAGTCTAAGGACTGAAGTCAAAGAAGTTGGTGAAGCGAGCCAGACTGGTCGCGTGGTTGAAAGTGCAAGTGATCAGGATGGGGATGCAAGCCAAGTTGGTCAAACCAATCAGGCTGGTGGAACGAGTCAATCAACTACACCAAGTCATACTGGTGAAGCAGACCAGACAGATCACAACGTTCAGAATGGTGTCGCGAGTCAGTATGGTGGGACAGGTCAATTTGGTCAAACCAATCAGACGTCTGGAACGAGTGAAACGGGTGAATCAAGTCGTGTTGGTGAAACGAATCAGATTGTTCACATGACTGGTGATATGAGTCAGACTGAAACTGGTCAAACGCATTTAGTTGATGAAACAAGTCAAACGAGCTTGCAGACAGGTGAAACGAGTCAAATTGCAGAAAGGATTGGGGCAGGTGAATTGAATCAGATTGGCCAAACGATTGAAAGTGGGCAAATAGCGAATCAATGTCTGCAATGTGGCGAGAAATGCAGTGATCCGAGTACTTTGGCTGAACACGTGAAAACGCATGGCACAGTAACACAGGTAAACCCATCTCAGGATACCAGCCGAAGTGCAGCTACACCACGTACCCCTGTCATCAGGGGAGTGAATTTGGGTGTTAGTGGTCGAAAGAAGACACACACTTGTGACATTTGCAACAAAAGTTTTGAACAACAGAGTGCTTTGGTAACTCATAAAAGGACGCATACAGGAGAGAAGCCTTTTGCGTGTAATCAGTGTGATTTGAGGTTCGCCCAACGCGGGAACTTGGTCAGACATCAGAGAAAACATAGCGGAGTCAAGCCTTTTAAATGTCAAGTATGTCACAAGGATTTCGATCGTAAAGATTTCCTGAAGTTGCATGAGACTAAGTGTCACTCCGTTGCATTACCCTGTTCAGAGAAAGTGAATACAGTACCGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5RAU9	Zinc finger protein 131 OS=Pongo abelii OX=9601 GN=ZNF131 PE=2 SV=1
Q8K3J5	Zinc finger protein 131 OS=Mus musculus OX=10090 GN=Znf131 PE=1 SV=1
P52739	Zinc finger protein 131 OS=Homo sapiens OX=9606 GN=ZNF131 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004838 (this species only)
Transcription factor family	zf-C2H2 · all TF in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13912 all species →	zf-C2H2_6	C2H2-type zinc finger	Domain	Interproscan
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR050589 all species →	Family	Ikaros C2H2-type zinc-finger	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24404 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000978 all species →	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0003700 all species →	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.