Gene detail

Detailed information of ENSLDHP00000030422.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB4023512.1, ankyrin repeat [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Sequence

CDS

ENSLDHT00000033130

TCTTCCCATGTTGGAGAGAAATTCAGTACATATCAAAacagtaataaaaaaatattagcggtcattttgaagaaattgattgtGAATTCTGTCATATTACCAATTGCCTTTTCTCTTATCATGAAAGAAGATAAAGAGGGTCATATTAATAGCTGGAAGTCAAAACCCCAAACGAATAGCAATGACGATGTGCCGGGAATTTTGGCTGCTGCTGAAGCGAACGATTTACAAGAAGTAAAACAGTTCGTTGAATCTGGTGTTGAGGTTAATGAAAAAGACCACAATGACGAAACGGTTCTTCATTATGCTGCATCCTCTGGTTCGCTAGAGATAGTTGAATACTTAATTGAACAAGGTGCAGACATAAATTGTAAGAACGTGGAAAATGAAACTGCACTTCACTTTGCTGCAGGTTGTGGTTCAATTGAAATTGTTGGATATCTACTTCAACATGGTGCTGATGTAAACtgcaaaaatgaacaaaataaaaCTGCTCTTTTCCATGCTGCAGAAATAAATAACCTAGAAATAGTCAGATATTTGGTTGAACATGGAGCTGATATAAATTGTATAAACATGGAAAATGACACTGCTCTTCATTATGCTGCTTACTATGGTTCAATGGAAATCGTGGAATACCTAACTGAACAAGGTGCTGATGTAAATTGTAAAAACAATGACAACGAAAGTCCTCTTCACTATGCAGCTCAACTGAATTCAATGGAaatgataaaacatttaattgaaCATGAtgctgatattaattgtaaaagcAAGAGTAATTCCACTGCTTTAAGTTATGCTGTTCAAACTGGTTCTCTGGATATTGTCGAATATTTAGTTCATCATGGTGCGAATGTGAAATGTGAAAGCAGTGGCGATGATAGTCCTCTTCACCATGCTGCTCAGCTGAGTTCAATGgaaatgataaaatatttagttgaacatggtgctgatattgatTGCAAAAGCGAGAGTAATGCCACTGCTTTAAGCTATGCTGTTCAAACTGGATCAATGGATATTGTccaatatttagttgaacatggtgcaaATGTAAATTATGAAAGCGGTGATAGTCCTCTTCACTACGCTGCTAAAGACTCACTAAACATGgtgaaatatttagttgaacatggtgcgaACGTGGATTTTAAAAATGACTGGAATACAACTGCTCTTCACTATGCTGTTGAATTCAAGTCTTTGGAAATTGTCAAGTACTTAGTTGAAAATGGTGCCGATGTGAATTGTAAAAACAATACTAATACCACTCCTTTAAGCTGCGCTGTTAAAACTGGGTCACTGGATATTGTCGAATACTTAGTTAAACAGGGTGCGAAAGTGAATTTTAGACATCGCAGAGATGAAACCGCCCTCCACTATGCTGTTGAGTCCAAGTCCTTGGAAATTGTCAagtatttagttgaacatggtgctgatgtGAGTTGTACAACCAAACATAGTGCCACTGCTCTGCATGTTGCTGTTAGTACTGGTTCGCTCGCGATAGTTAAATATTTAGTTACGAAAGGCGCTAACGTCACCGCCAAACAGCATCGTGGCGAGAAAACAGTTCTATATTGGGCGTGTATAAAGGGGAATGAATTAATTGTTGACTACCTTCTGCAACATGGAGCGAAGGAAGACATTCATGACCACGATCGTTTCGGGCGTTCTTGTTTCGGTAAAGCATGCTATGAAGGCAATGCTGCTGTAGTTCGAACGTTTCTGAAGTTTGGGTTTGATATACGAAAGGAGATAAAACTGCTATGTGGCAATAAAGAAATTGTCAATATGATCAATCTGGAACTAAATAAGTCCAGCAAACATCGCGAGAAAATTGAGGTTTTGAAGACGCTGGATTCTAAAAAGTTAAGAAAGGTAATACACTTGCAACTAGTATACTTTTCTCACTCTTACCCGCCCggccctgcccccccccccaccccaccccacccctTCCATACTTCTAGGATTTGTTCAATATACTTTAAGCTTATCGTGTAG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0012927 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF13637 all species →	Ank_4	Ankyrin repeats (many copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24141 all species →	2-5A-DEPENDENT RIBONUCLEASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0004540 all species →	Molecular Function	RNA nuclease activity	Interproscan
GO:0006396 all species →	Biological Process	RNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000030422.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.