Gene detail

Detailed information of ENSLDHP00000030699.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: XP_028403676.1, transient receptor potential cation channel subfamily A member 1-like isoform X2 [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000033432

ATGGGGAATGAAGTTAGAGGTCACCGAGAATTAGTTCAAGTATACAGTTCTTTTTCTGGCATGAGCAATGTCAGTTTCCTTACCCCACTGATGAGGGCTGTTCGAAGTGGGTCAACTTCGACGTCATTATTTCTCCAGAAAACAGATTTGAATGATCTGGATATCAAAGAAACTGACAATTTTAACCGAAATGTGTTTCATTATGCAGTCTCAAAACCagatattttaggaaaaatattgaagCAACTTAAAACAAAAACATCCGTTCAAGAGGCTCTAAATCAAGTGGATAATGACGGAGAAACTCCAATTCATCGTGCTGCTAAAATAGCAAATATTGAGTCATTAGAAATACTTTATGAATATGATAATTCATTAATGAAGTTAAAAACGACGACGGGAAAGAGGTCAGTCCTCCATTTGGCTGTGAGAAGCAAATCAGTTATCGCTGTGAAGTTTGTCATCAGTAAAGATCCCGACTTGGGGAACAGTGTGGACAATATGTTACAAACGCCTGTCCATTATGCTGCCAGCCTGAAACAGACCAATATTTTGGAACTTTTAGTATCTAAAGGATGTGATACAACAGAAGCGGTCACGAATGACCAACTACCAATACATATCGCAGCAGGTAAAGGTCTGCGAAACACGGTTGAACTCTTGTTACGAGAAGACCCTGATGTTGTTGACGCAGTTGATAATCATGGCCAATCACCCTTATTGTTGGCAGCTAAGAATGGTTTCCCTAATGTTGTATCTTACTTACTCGCTAAAAATGCTCATCACGGATTGAAGGATAAATTTAGTCTTACACCATTTGATTGGGCAGTGAAACGCACATTACCAGATGTTGTTCAGGTTTTCCTTCAAATGGATGAGTGGAAACAGGTGGTGAGTAATACTTGCAGTGGCCCTGAAGGATGTTTGGCAATGATGATTAAAGTTATGCCTAATATGGCGAAGATGTTATTAGATAAATGTGTAACAACTAAAGGAACACAAGACCACCCTGACAGTTATCAAGTCATCTATGATTTCTTCTGTCTTGAATCAATAGATAAGAAGGGTGGCTGTTCTCGGTTTGAAGCTCTGGATCTGATGGCAGAGACCGTATGCGAGATTTGCCTGCGTCACCCAGTAGCTGTGAAGTATGTTGACATAAAATGGAGGAAACGAGGATTCAAATTCACTGTGGCTTTGATATTGCTGACTCTGCTCTTTCATATATGTCTTATGCTTTATACAACACGAGTTATTGGAGTGGTAAACGAGCGACACATTGTCAGTAAAAACGTAACGATACATGTACGCGAAGGTAGACCACCAAATTCTTCTGAGATGATGGCACTAAGAGTAATAATGCTGGTTATtgtaactgcagcaatactgaAAGATGTTGTACAGATGATGATGCAACCTTCTCACTATTTCACTACTACATGTCACTACTACAGACTTGCATTATTTATCAGTGTTATGTTATATCTACTTCCTGTGAACCAAGAAATAACGGCAAAGCAAATTGGATATGGTGCTGTTACTGTTTTGCTATCATGGACGAATTTAATGCAGTTTTTGAAAGTTCTTCCAGTTATTGGTATATATATCATACTTGTTGAAAAAGTGTTCTGGACACTATtaaagATATTTGTCGTGGTCGTAATATATTTGCTAAGCTTTGCCAGCACCTTCTATGTACTTCTCGCAGAACACGAGAGTTTCAACAAtatttatatttcattaatttcaacATTTGCGGCCATGTTGGGTGGCGTTAATTATGATGATCTTTTTGTCACCGTTGGATGGTATCCAGAgatatacaaatttaaaatggtGGTCCTTGTTTTCTTTCTGCTGACAATGTCTATTGTTGTAAACAATGCTTTGAGTGGTCTAGCTGTTGGTGATGCCAATGAAGTGATGAAATCTGCAAGTTTTGACAAGTTTCTACAGAGGGCTAAATATATTATCCAACTTGAGAGAGGACTGAACAGTATTCCTTACCTGAAGAGGGAAGAAGATGAATGTTTGATTGAATTTCCACAACGGAGAAAGACTGTCTTCCACAAAATTTCTGATTTACTCTACTTCGGTAGCGAAATGGACGCAATTGATGGTGCAAGTGAAGAGAGTGAACAAGAATATGAAATGGAGATTGCTTTGGAAGATCATATTGAAAAAGCAGTCGAACTTAAATTAGAAAATCTTCGTTCAAACCTACAACATGAAGTGATAGGAATCCGGGATCAAATTAAAGAGGATTTGAAAGAGAAACTGGGGAAAATAGTAGAAAAGTTGGAGTAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR052076	Family	Transient receptor potential cation channel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47143	TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL PROTEIN PAINLESS	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04984	TRPA1, ANKTM1; transient receptor potential cation channel subfamily A member 1	-	Ion channels	ko04040	deepkoala