Detailed information of ENSLDHP00000031201.1 in Eunicella cavolini

Genomic Location: chr3:31299732...31300154
NR annotation: CAB4016529.1, zinc finger 236 isoform X1 [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002161 (this species only) · gene tree & orthology
Transcription factor familyzf-C2H2 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00096
all species →
zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF01096
all species →
TFIIS_CTranscription factor S-II (TFIIS)DomainInterproscan
PF13894
all species →
zf-C2H2_4C2H2-type zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR036236
all species →
Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR001222
all species →
DomainZinc finger, TFIIS-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24390
all species →
ZINC FINGER PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0006351
all species →
Biological ProcessDNA-templated transcriptionInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0000978
all species →
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSLDHP00000031201.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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