Gene detail

Detailed information of ENSLDHP00000031748.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: CAB4005123.1, PDZ domain-containing 8-like, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSLDHT00000034486

ATGCTAATATCAATTGTTCTTTTATTCAAACTGCAGGAACTCAGAAAGTTCTTTAAAAAGCTCTCGGAATTGCCAGAAGAAGAAATCAGAGAACGACTGAGAACACCTGAAACATGTGTTTGTTTAAACGTCATATTTGCTTTTCTGTGGAAAGAATGGAGGGACACGCCCGAAATGAAACGAATATTCATATCAAAATTGACAAGAGAATTCAATGATCTTATTGGTTCCAAAGCAGCTAAAGGAATTATTGAGGAAATCAAGGTTAAAAGCTATAGTCTTGGAGAATCATTGCCCATTATTAAAGatGCTGCATTGATAAACATTAAGTCCCAAAGCGCCGAAGATGTTCCGGATGAAATTGATATTGCACTTAACATTGCATACTCTGGAGGGTTTTACGTCAGCGCTGATTTCGCTCTGGCCTTGAGCAAGTCTGTCTATTTGTCTATCAAAGTTGTGAAAATATCAGGAAAATTGAAGCTCAGTTTTCGCAGACATCCTACCTCGCGTTGGTCATTTTCATTTTATGAGGAACCAGAACCGACGATTGAGCTTGATGCTGAGTCACGATTTGAAGGCAAAAACTTTCAACAGTTGAATTCATTAATTATCAAGCATTTTAAGAAAGTAATTCGAAGAAAgtacattttaccaaattatATCATTCGCTATAAACCTTTTCTTCGAGCCAAAATCCCTCAGGATGAACAAAATGGGTTATATATTCACAACTCGCAAGTTACAGTTGGTTCAGTGGCCGTTCAAGTCATTGCTTGTAGCCATCTTCCATTGAAAAAGAAAAGTAATGCGGGAAGTTGGACATTCTGTAGTCTGTCtgttgattccattccttttgCAGAACGGAAGAATGATGATCCTTCATTATGGCCCATCGCAGAGTGCGAGGTAGTACGAGGTAATGAGCGAAAAATTGGTCTCACATTACACGAGGTTTCTTGCACCGAGGGAGATAACAACCAGAACAAAATTGTTATAGACAGCATTGACCCGGATTCTCCAGTTGACTATAGTTCTCTAAAAGAAGGTGATATTATATTGGAAATTAATGGAATGCCTGTTGACGATGCCAAGCAAGTGTCGAAACTCATTCGAGGATCAAGTAGAAGGCTTTCTATCATGGTCAAAAGACCTCCATCGTACATGCCATTCTCGAAAGCTAAAGAACTTTCGCAGAAATTTGACTTCGACTCGGCCTCTGTTTCCGGGGAAAATTCTTCTGAATTTAATGATGTTGATGATTTTCAAGAtgaatttattaatattgtGATGCCGTTAATTAAGAATGGTCCGGATGACAGAAAAAGTGATGACACCATATCAAATTTAAGCGTATCATTGAGTAAAAGTGAATATGAACGATCTGGAAGGTATAACACCGAAATCCCCCCGTCAAGCCCAATTTTACTTGAGAAACCTCAACAAAAGAATAATGaaagtgaagaaatatttggTGACGATTATGAGAAAGGATTAAATAGTTttgaaaaaaagacaaaatttgtgaaatcGTCCAAGAATCCACAATGGAATGAAACATTCGAACTTCGAGTCGAAAAAGAACATAAATATCTCAATGTTCTTGTCTGGTATCGAATTCGGATTGAATCTGCAAAAGAAGACAACAACGAAGAACAGCAAACAAAAGATATACTGCTGGGTTATGTCACCATCCCATTAACAGATATTGCTATTCAATGTTTGGAAACTGGTGATCGATATCACCAACAGGTGTATGTGCTTGTTTCAACAGCATACGACAAAGTATTAGCAAGTCGATCCTATCTCAATGGTCATCCTGGTTTAAATAGAGCTGCATGCTGCGGTGATATAACATTGGCTTTTACATACAGACCATCATTTGATGATGACGAAGAAACATCAGTTAAGACAAAGGTTCTTACATCAGAGAACATCGATAAGGAATTGTCGCGGTCTTCCGATAACCTAGAATTTTTAGATATTGAAGTAAAAAAGCACAACTTTGGGGACACCCAGTTTTACTATCAAACCAAGTGTGACTTCTGTACGAAAAAGGTATACATccagagcgttaattggggggggggggggggtgtatattcatatattcgtgttatgcccgacggatttcttttgaaatcagttgtttttaagttaatttcaaaagaaattaTTCCTTTTGTGGTCTTTGTTTTAGATCTGGACAAAATCCGCGTATCAGTGTCGCTTATGTGGTATGGCGTGCCACAAGAAATGTTTGCAACGAGCGCAAATGTATACACAGTGTTACAGgtctatattatttttttcattctcACTGTCTTAATTATTTACGACTTTGATAACAAGATATGGATGAATATCAGATAA

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF00168	C2	C2 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001478	Domain	PDZ domain	Interproscan
IPR000008	Domain	C2 domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR031468	Domain	Synaptotagmin-like mitochondrial-lipid-binding domain	Interproscan
IPR039275	Family	PDZ domain-containing protein 8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21519	PDZ DOMAIN-CONTAINING PROTEIN 8	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008289	Molecular Function	lipid binding	Interproscan
GO:0044233	Cellular Component	mitochondria-associated endoplasmic reticulum membrane contact site	Interproscan
GO:0051560	Biological Process	mitochondrial calcium ion homeostasis	Interproscan
GO:1990456	Biological Process	mitochondrion-endoplasmic reticulum membrane tethering	Interproscan