Gene detail

Detailed information of ENSLDHP00000032770.1 in Eunicella cavolini

Genomic Location: chr4:19699944...19707882
NR annotation: XP_028401817.1, calponin-2-like [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9WVA4	Transgelin-2 OS=Mus musculus OX=10090 GN=Tagln2 PE=1 SV=4
Q5XFX0	Transgelin-2 OS=Rattus norvegicus OX=10116 GN=Tagln2 PE=1 SV=1
P37802	Transgelin-2 OS=Homo sapiens OX=9606 GN=TAGLN2 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000602 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00402 all species →	Calponin	Calponin family repeat	Repeat	Interproscan
PF00307 all species →	CH	Calponin homology (CH) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001997 all species →	Family	Calponin/LIMCH1	Interproscan
IPR001715 all species →	Domain	Calponin homology domain	Interproscan
IPR050606 all species →	Family	Calponin-like	Interproscan
IPR036872 all species →	Homologous_superfamily	CH domain superfamily	Interproscan
IPR003096 all species →	Family	Smooth muscle protein/calponin	Interproscan
IPR000557 all species →	Repeat	Calponin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47385 all species →	CALPONIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0031032 all species →	Biological Process	actomyosin structure organization	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0007015 all species →	Biological Process	actin filament organization	Interproscan
GO:0015629 all species →	Cellular Component	actin cytoskeleton	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000032770.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.