Gene detail

Detailed information of ENSLDHP00000033870.1 in Eunicella cavolini

Genomic Location: chr4:49981235...49995064
NR annotation: CAB3986140.1, diaphanous homolog 2 isoform X2 [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000036673

ATGAAATGGAGCAAGAATGTTAATAATACAGTCCCCTCACAAGGCCTAGAAACACCAACAGATTACATTCATGAACTTCTTCGGACTGATGTTTCAGCTGAACACCTTCTTCGATCTTTGCGTTCAACACGTGTTTCACTAACTGGAAGACCACTTGGAACTGGTACAACACACCATAAAATTCAACATGAAATTATCAAGTGCCTGAAAGCTTTTATGAACAACAATtttggtttaaatttGATGATGAAAAGCGAAGATGGTTTGTTGCTGATTGCAAAGTCAATGTATCCTGATGATCCCAGCATGATGACTGATGTCGTTAAACTCATGGCAGCTCTGTGTTTAGTTGACCACTCTAAAGCTCTTCAAGTGATGACGATTTATGGTGAAAGTGAGGAACATGAAAAACGCGGACGATTTTATAACGTTTCGCACGCCTTAAAACACAGTGACAGTGTGCAACTTAAGGTGGCGTGTGTCCAGTTTATAAATGCCCTCGTCAGCAAGCCAGATGATTTGGACTTCAGACTTCATCTGCGAAATGAATTTTTGAGAGAAGGATTAATGGAAGTGTTGAAGAATCTTCGTGATATTGGTAATGATGAACTGAATGTACAACTTGACATCTTTGAAGAGCATAAAGAAGATGACTTTGCTGAACTGTCACACAGATTGACAGATATACAAGTCAATTTTGAAGAACCATCAGAATTATTTCAGATGTTAGTCAGTATTACGAAAGACAGTGTTTCTGAGAGTGCATTCATTTCAATCTTACAACATTTGCTTCTCATTCGAGATGATGTTTATGCGAGGACACAATATTTCAATCTAATAGAGGAATGTGTGAGTCAGATTGTCCTGCATAAGAGTAACGCGGATCCTGATTTTGCTGCTACGAAGAGATTTGAAATAGATGTAGAGTACCTAATAGATAATATGGTGGATAAAGCTAAATTGACTGAATATATGGAGAAAGCAAATTCACTGGAGACCAAGCTTGAGCTAGAAACCACACTACGACAGGAAACTGAGGCAAAATTTAGTTTAGCAACAAGTAATCTGGAAAAGAAAGTTGCTACTCTTGAAAAAGAAAACGCAGAATTGAAAGCAGTGAGTATAAAAGAATTGTATGTTGCAACTTATTTatggtatttaatatatatcacACAGTTTAGTATGGGGAGAGTTTTAGACACATTATGGTCACCATTTTCTCAGTCACTCAAAAAATCTTCAACTGATAGTTTGTATGAAGAGAAATATCCAAGTCTTTCTAACACAAGTTCATCTCGTCCACGTTCCCTTACTTCATCTTCGCTTTATGATCTAGACATTACGTCACTCTCTTCAGTCTCTTCCTCTAGCTCAATCCAGTCCGCTAGATCTCTTCGTAGATCTCGTTCAAAACGCAGTGCTAAACCCTCGGACTCGTCAGATGAAGAACTCGTAATGATGAGCTCTTTACCACAACCGGATTGTTGTCGTATACAGAAAGCTAAATTGATGTCAGTTCCTTCACTCAATCCCTCTACCAGTGATCTGTCATCCATGCCAGCACCACCAGGAAGTGTACCTCCCCCACCCTCTCTCCCTGGTGGAGTATCACCCCCAGGAGTAATACCTGCCCCACCTCCCCCACCGCCACCCCCTGGTGGAGTGCCACTTCCCCCACCCCTCCCAGGAGGAGTGCCTCCCCCACCTCCTCCTCCAGGGGGAATTCCACCTTCCCCACCCCTCCCTGGTGGAGTTCCTCCTCCACCCCCACCACCTGGTGGTGgaccaccccctcccccaccggTACCTGGTGCAGGCCCCCCACCCCCTCCTGGAATGCCAATGTTTAACAGAGGTCCACAGTTACCACCAGGAGTGGCACCAAAGAAGAAGTATAAACCTGAAGTCCAAACTAAACGAGCTAACTGGACTAAGATCAAGAACAACAATATTAAAGAGAATTCATTTTGGGCGAAAGCTAAAGAAGATAAGTTTGAAAAAGATGAAGTGTTTGATGCTCTATCTAAAACATTTGCTGCTAAAGTTTTCACAGCAAAAACTAAAGATAAAGATGAAGGTGGGAATTTGCCTGCTAAAAGCAGCAAGAAGAAAGCCAAGGCTTTGAGAGTTCTTGATCCGAAAAGTGCACAAAATCTATCCATCTTTTTGGGATCGCAAAAAACGTCTTTTGAAGATTTTAGAAAGATGATTTTGAATTGTGATGAAAATCTAAAGGAGAGCGCTATTGAATCATTGTTAAGATATCTTCCGAGTGCTGCTGAGGTTTGTTTTTCACCAAATTTGAAGAAGAAATTTCCTGAAGATGTTCAAGACACCAAACCAAATATTGTCAATGCTACTGCTGCATGCCGGGAAGTGCGGTCAAGTCAAAAGTTTGCTAAGTTTTTGGAGGTTGTTTTAATGGTGGGAAATTATATGAACGCTGGCTCCAAAAATGAACAAACCATTGGTTTTGAAATGGCATTTTTAACAAAGTTAAGTTCGACCAAATCAGTTGATGGTAAACTTACTTTGCTACATTTCCTGGAAGAAGTGATATCAGCCAATTATCCAGAGGTGGCTGGCTTTGAGACCGAAATCAATCACGTTGAAGCTGCAGCAAGAGTTTCTCAAGATGTACTACAGAAAGCGACCAAGAGTATGGaaacaaatttatcaaaattgGAGCGAGAATTAGAAAATAGCGGGGATCCAGATGATCCCGAAGATAAATTTAAAGAAGTCATGTCGGAATTTCACAATCAAGCAAAAGAACAATGTGAATTATTGGTGGAAATGTTTAACAATATGACAAATATGTTTAAAGAATTAGCAGATTATTACTGTTTTGATTTGAAGAAAACACAACTCGAAGATTTCTTTGGTGATTTAAGTTCATTTTTACAACAATATGAAAATGCCAAGAAAGATAACATCAAAAGAAAAGAGCGTTTAGAGAAAGAAAAGAAAGCAAGAGAAAGAGCTGAAATGGAGAAAGAACGAAAGAAGAGAATCGAAGAAGAAAAGGCAAACCGCAAAAATTTGGTAGATATATCTTCAGAGAATCAAGAAGGTGTTCTTGATGGTTTAATGGAAGCTTTGAAAACAGGAAGTGCATTCAGAGATCCATCAAGACCTGGCAGGAAGAAAAGACGAGCCGTGAAAATGCCGGGAGCTGATGTTCTTGCTGGGGCtttgaataagaaaaataatgaaGAAAATGAGGCCGACGCTTTGCTAGCTGAACTTAAAGCATTGTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O60879	Protein diaphanous homolog 2 OS=Homo sapiens OX=9606 GN=DIAPH2 PE=1 SV=1
F1LVW7	Protein diaphanous homolog 3 OS=Rattus norvegicus OX=10116 GN=Diaph3 PE=1 SV=4
Q9Z207	Protein diaphanous homolog 3 OS=Mus musculus OX=10090 GN=Diaph3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002427 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06367 all species →	Drf_FH3	Diaphanous FH3 Domain	Repeat	Interproscan
PF06371 all species →	Drf_GBD	Diaphanous GTPase-binding Domain	Repeat	Interproscan
PF02181 all species →	FH2	Formin Homology 2 Domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015425 all species →	Domain	Formin, FH2 domain	Interproscan
IPR042201 all species →	Homologous_superfamily	Formin, FH2 domain superfamily	Interproscan
IPR051412 all species →	Family	Formin Homology Diaphanous subfamily	Interproscan
IPR010472 all species →	Domain	Formin, FH3 domain	Interproscan
IPR010473 all species →	Domain	Formin, GTPase-binding domain	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR014768 all species →	Domain	Rho GTPase-binding/formin homology 3 (GBD/FH3) domain	Interproscan
IPR014767 all species →	Domain	Diaphanous autoregulatory (DAD) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45691 all species →	PROTEIN DIAPHANOUS	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005884 all species →	Cellular Component	actin filament	Interproscan
GO:0030041 all species →	Biological Process	actin filament polymerization	Interproscan
GO:0003779 all species →	Molecular Function	actin binding	Interproscan
GO:0016043 all species →	Biological Process	cellular component organization	Interproscan
GO:0030036 all species →	Biological Process	actin cytoskeleton organization	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000033870.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.