Genomic Location: chr4:2807195...2865109
NR annotation: XP_028405523.1, UDP-glucose:glycoprotein glucosyltransferase 1-like isoform X1 [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families
| CDS |
| ENSLDHT00000037097 |
| Protein |
| ENSLDHP00000034249.1 |
| UniProt accession | Description |
|---|---|
| Q6P5E4 | UDP-glucose:glycoprotein glucosyltransferase 1 OS=Mus musculus OX=10090 GN=Uggt1 PE=1 SV=4 |
| Q9NYU2 | UDP-glucose:glycoprotein glucosyltransferase 1 OS=Homo sapiens OX=9606 GN=UGGT1 PE=1 SV=3 |
| Q9JLA3 | UDP-glucose:glycoprotein glucosyltransferase 1 OS=Rattus norvegicus OX=10116 GN=Uggt1 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003077 (this species only) · gene tree & orthology |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF06427 all species → | UDP-g_GGTase | UDP-glucose:Glycoprotein Glucosyltransferase | Domain | Interproscan |
| PF18403 all species → | Thioredoxin_15 | Thioredoxin-like domain | Domain | Interproscan |
| PF18402 all species → | Thioredoxin_14 | Thioredoxin-like domain | Domain | Interproscan |
| PF18401 all species → | Thioredoxin_13 | Thioredoxin-like domain | Domain | Interproscan |
| PF18400 all species → | Thioredoxin_12 | Thioredoxin-like domain | Domain | Interproscan |
| PF18404 all species → | Glyco_transf_24 | Glucosyltransferase 24 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR009448 all species → | Family | UDP-glucose:Glycoprotein Glucosyltransferase | Interproscan |
| IPR040525 all species → | Domain | UDP-glucose:glycoprotein glucosyltransferase, thioredoxin-like domain 4 | Interproscan |
| IPR040692 all species → | Domain | UGGT, thioredoxin-like domain 3 | Interproscan |
| IPR029044 all species → | Homologous_superfamily | Nucleotide-diphospho-sugar transferases | Interproscan |
| IPR000014 all species → | Domain | PAS domain | Interproscan |
| IPR040694 all species → | Domain | UGGT, thioredoxin-like domain 2 | Interproscan |
| IPR040693 all species → | Domain | UGGT, thioredoxin-like domain 1 | Interproscan |
| IPR040497 all species → | Domain | Glucosyltransferase 24, catalytic domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11226 all species → | UDP-GLUCOSE GLYCOPROTEIN:GLUCOSYLTRANSFERASE | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003980 all species → | Molecular Function | UDP-glucose:glycoprotein glucosyltransferase activity | Interproscan |
| GO:0006486 all species → | Biological Process | protein glycosylation | Interproscan |
| GO:0005783 all species → | Cellular Component | endoplasmic reticulum | Interproscan |
| GO:0018279 all species → | Biological Process | protein N-linked glycosylation via asparagine | Interproscan |
| GO:0051082 all species → | Molecular Function | unfolded protein binding | Interproscan |
| GO:0071712 all species → | Biological Process | obsolete ER-associated misfolded protein catabolic process | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K11718 | HUGT; UDP-glucose:glycoprotein glucosyltransferase | EC:2.4.1.- | Glycosyltransferases | ko01003 | deepkoala |
Genes whose expression across the transcriptome samples of Eunicella cavolini tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.
No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.
Whether this gene can be visualised in the single-cell atlases of Eunicella cavolini, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.
No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.
Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.
No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.
Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.
| Analysis | What it does | Status | |
|---|---|---|---|
| Primer design | Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed. | template found | open → |
| BLAST | Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start. | template found | open → |
| Expression heatmap | Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it. | no expression matrix | – |
| Gene family / orthogroup | Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue. | open → | |
| Gene set analysis | Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it. | open → |
