Detailed information of ENSLDHP00000035927.1 in Eunicella cavolini

Genomic Location: chr4:20383722...20385043
NR annotation: CAB4026586.1, LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000290 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04852
all species →		ALOG_domALOG domainDomainInterproscan
PF00589
all species →		Phage_integrasePhage integrase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006936
all species →		DomainALOG domainInterproscan
IPR013762
all species →		Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR011010
all species →		Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR040222
all species →		FamilyALOG familyInterproscan
IPR002104
all species →		DomainIntegrase, catalytic domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31165
all species →		PROTEIN G1-LIKE2Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0006310
all species →		Biological ProcessDNA recombinationInterproscan
GO:0015074
all species →		Biological ProcessDNA integrationInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0009299
all species →		Biological ProcessmRNA transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSLDHP00000035927.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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