Gene detail

Detailed information of ENSLDHP00000038405.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3998577.1, histone-lysine N-methyltransferase SETD2 isoform X2 [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Sequence

CDS

ENSLDHT00000041779

ATGGATTTGAGCAGCTCAAATGATAGCAAGACAGACGAATGTATTTATAATGAAGGCATGAACCGTAAAAGTGAGACAGACAGTGAGCATAATGATGATGCATCTTCAATATCAGAAGAACGTTATCCAGCGTTTGAAACACTTTATGAGAATATATACCTTGGCAGCAAAAAGAAGAGAGTAAATAAGGAAATCCGTAGAATGACATGTGATTGCTCATATTGCCCAGATGAGAATGATTTTGTTGGATGTGGCGACGATTGTATAAATAGACTTCTTATGATTGAATGCAATAACAGATGTCCTTGTGgagaattttgttccaatagAAAATTCCAAGAGGGACAAAAAGTTCACATCGAAGCATTTAAAACAGAGAAAAAAGGATGGGGATTGCGAACCTTGGAAGATATTTCAGCGCATCAGTTTGTGATGGAGTATAGTGGAGAGGTTATGGGTTATGAAGAATTTGAGAAACGTGTTGAGATGTATGATAGAGAAAACAGACGTCATTATTATTTCATGACTCTGAGAGCCGACGAGATTATTGATGCAACATACAAGGGAAATTTATCAAGATTTGTCAACCACAGCTGTGACCCAAACTGTGAAACACAAAAGTGGACAGTGAATGGTTATTTAAGGATAGGTTTCTTCTCGGTAAAAGACATCCCAGCTGGAACAGAGCTGACGTTTGATTACAAGTTTCAACGTTATGGGAAGAAAGCTCAAGTGTGTTACTGCGATTCTCAAAATTGTCGTGGAATTATCGGTGGCGAAAAACATACACCACTCAAGTCAATCATTTCTGGTAGACCTGCTTCCCCTGCTCCTGCTAATTCACCAAGAAGAAATCGAAGAAGGCGATTGGCTGAACAGTTTGATGATAAACCATTGGAAATTGAGATCGCTCAATTACTTGCTGGAGACAAAGGAATCAAAACAGACGACCAAGCactcaaactttcacagttcaTGGTCCGGGCAGAAACGACGTCTCAACGACTCTTACTGCTGGACGCACTCGCGGCTACCGTAGATCAAAGTTGTTTGCGGAATTTTGTCAAATATCAAGGCTTATCACTGCTCTGGAGTTGGATGGTTGATCTCGGAGAAAACTCGCTACATCTACAAAAGAAGATCGTTCAAGTGCTGAAACATTTGCCAGTCGCGAATTTGAACCAAGTCAAAGATACAAAGGTACTCAAAGTGATCAACAAATGGGCTAAGAAATCTTCGGTATCATGTGGTCCCGAGGAAGAAACGAGTTCTAGCGACGTCGATTCCCGAGGACTAAGCCCTCCGGACACTTTAGACGACGCGTCGAGACGAGAACCTCACATCAGCTCGAGTTCTGACGAGTTGCAAAACTCTTCGAAAAGTATCGAAATGCAAAAATCCGCGGAGACAGATTGCTCAAAATCTGATATTGAATGTGGGATAGTAGATCAAAACGAAAAGACTGCAGAATCTTCGCCCATGGAGGACAGTGTTTTCGAACCTGGGGAAATACGATCAGACGAGGAACTAAAACCCGAGGGCGACAAACCGGAGGGGCTTAAGTCAGAAGTACTAAACTCCGAGGGGCAAAAGCCCGAAGGACTTAAATCGGAGGAAGTAAAACCCAAAGAGCAAAAATCCGAGGGTCTAAAATCGGAGGGTTTAAAATCGGAGGGTTTAAAACCTCATCGGGTAAAAGACTCTCGCCGACATAAACGTAGTATGTACAGTAGGATAGTTGAGAGAATTGGAGATTCATCAGAAGAAGAGTCGTCAAGATGGTCGGAAGATGATATCACCTCAAGTGATAGTGAATCCATTGTTGATCTAGCTGCTGACTTGTTAGACCAATGGAGCAGTTTAAAGGAAGTGTATCGAATTCCAAAAAAGTCTACCCTCGTGGTACAGCAGGAACCCGAGTCTACGTCAGGAACAACAGAAGGGACTGATTCAACTCATAATGCCAGAACCGAGAGAAGCTCTCCAGTTATTCCAAAAATCGATGGAGATCTTTTCAAAAAAGACGAATTTCTTTCCAAACTCGGAGAACGAGAATTTCACAATCCAAAATCATCGCAGCGCAACACACCAGCTACATCGGCCGATCTTCCATCTCTTATGACTGCTGGCTATATCGAGTCTAGTGAAGGTGTCCATGATTTGAGCAGAATGCCAATTCATCAGCGCTTGCAAAATGTAGCAAATACTACCAATGAAGAGAAGTTTACTGGATGGCATGCCAAAGCTGGTGCTAGGAGGGGAGGCCGTAAGGGGCCTTATCCTTCCCCCAGAGGCCCACAACAAGATTGGCCACCTCGACACCAAACACCGTCGCAATTTAACCCACCTATCGCAAACCCTTCAACCCATCCTGGTATGCAGAGGCCAAATATGCCGAATAATCAATGGCACCCACAAGAACCCCCCTCCCATAACCCTTACCCTAACACCTCACTTGGCAGTCAGGGAGGGGTGCAACCATCTGCGCCACCTCAGTTCTCTGTGGCAAATCAGAACCCCATACAACCAACCCAGCCACCCTACTTTCAACCATCAGAGCAGTCCAAGCCTGATCAGCAAACTGGATACCAAACAACATGGAATTCTAATCCAACGTTTGTACCAGACCAGGGAGCTGGTCACGTGCCACAGGGTGCCAGTCACGTGCCACATGGCTATGGTCAGTTACCACCACCTCCACCCCAACATGGCCAGGTAACACAGGGGCAATTTCCCCCTGGTCATCAAGTTCCTCCCAACCAATACACTCCTGGTTATACAAACCAGACCACTCCATTTGGTTATCAACAATCAGCCAATCCAAACCAACCATACTCTCAACCAGTTTTCAATCCATTCATACCAAACCAAAATAACCCCCCACCAAACCAATTTCCTCCCGGTTATCCACCTCAGTTCCCTACAAATCCTGCAACATACTCTCTTACTCCACCAGCATCAAATGTACCAGCAACGTATTCGGTGAATGCTACTCAACCACCGCACTTTGCCCCTAGAGAACAAACTCCGGGGTCTAATGTACCTATGGTGAGTTCAACAGTAGGAGGGTCTGAATCGATGGATATAGTAGATCCAGGTGAGgcatataataaaacacaagaagTTCCTCTACCGCCGGACTGGAAGAAAGCTTATGATGGAGAAGGTCGAGCGTACTACTATCACGTCGTTACAAGGCAAACGCAATGGGAACCACCTGTTGCTGATCGCAGTCCGCCTACGCCAGAGCTTGGTTACCTTGGTGATGAATTGGATTCAAGTATGGATCCCAGTCTCTTTTCTTCGCACGTACCTCAAGATGTTACGATGGAGGTTGTTGACTCTACAAAGCAGCGAAAGAAACCCAGAACGCCATCCACGCCGCCTGGTTCGCCTCCTAAAAGCCCTATAAGCAAGTACACAACGGCGGCAGCCGACACGACGGACATAAGGAAAGGTGCTTACTCACCCTCTTCGTTATTACAAGGACAACATCTCACACCAGAACAACGAAAACGTCGAGAAACATTCAGGATGAAGCTTTCAGCTGTGGTTGTCAACTATCTCAATCCTTACCACAAAGTTGATtgtaaaattggaaaaattACGTCGGTCCCTGATTTCAAGTTTCTAGCCCGAAAGTTGACTCATGGCGTTATGGTGAAAGAACTGAGTCGCACTAAAGACGAAAGTCAGTTAGCTTGCAACGACTCCGTGAAGATAAAAACCAAAGAGTATATTCGTAATTATATGCAGAAGTTTGGCCCGGTGTATAAACCTTCATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9BYW2	Histone-lysine N-methyltransferase SETD2 OS=Homo sapiens OX=9606 GN=SETD2 PE=1 SV=3
E9Q5F9	Histone-lysine N-methyltransferase SETD2 OS=Mus musculus OX=10090 GN=Setd2 PE=1 SV=1
Q9VYD1	Histone-lysine N-methyltransferase Set2 OS=Drosophila melanogaster OX=7227 GN=Set2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004034 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08236 all species →	SRI	SRI (Set2 Rpb1 interacting) domain	Domain	Interproscan
PF00856 all species →	SET	SET domain	Family	Interproscan
PF00397 all species →	WW	WW domain	Domain	Interproscan
PF17907 all species →	AWS	AWS domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013257 all species →	Domain	Set2 Rpb1 interacting domain	Interproscan
IPR046341 all species →	Homologous_superfamily	SET domain superfamily	Interproscan
IPR001202 all species →	Domain	WW domain	Interproscan
IPR036020 all species →	Homologous_superfamily	WW domain superfamily	Interproscan
IPR001214 all species →	Domain	SET domain	Interproscan
IPR044437 all species →	Domain	SETD2/Set2, SET domain	Interproscan
IPR038190 all species →	Homologous_superfamily	Set2 Rpb1 interacting domain superfamily	Interproscan
IPR003616 all species →	Domain	Post-SET domain	Interproscan
IPR042294 all species →	Family	Histone-lysine N-methyltransferase SETD2, animal	Interproscan
IPR006560 all species →	Domain	AWS domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46711 all species →	HISTONE-LYSINE N-METHYLTRANSFERASE SETD2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0006355 all species →	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0046975 all species →	Molecular Function	histone H3K36 methyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0010468 all species →	Biological Process	regulation of gene expression	Interproscan
GO:0016279 all species →	Molecular Function	protein-lysine N-methyltransferase activity	Interproscan
GO:0097198 all species →	Biological Process	obsolete histone H3-K36 trimethylation	Interproscan
GO:0042054 all species →	Molecular Function	histone methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000038405.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.