Gene detail

Detailed information of ENSLDHP00000039656.1 in Eunicella cavolini

Genomic Location: :...
NR annotation: XP_028417414.1, lupus La protein homolog B-like [Dendronephthya gigantea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P28049	Lupus La protein homolog B OS=Xenopus laevis OX=8355 GN=ssb-b PE=2 SV=1
P28048	Lupus La protein homolog A OS=Xenopus laevis OX=8355 GN=ssb-a PE=2 SV=1
P40796	La protein homolog OS=Drosophila melanogaster OX=7227 GN=La PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08777	RRM_3	RNA binding motif	Domain	Interproscan
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR014886	Domain	La protein, xRRM domain	Interproscan
IPR050374	Family	RRT5/SRSF/Splicing Factor SR	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan
IPR002344	Family	Lupus La protein	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23003	RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:1990904	Cellular Component	ribonucleoprotein complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11090	LA, SSB; lupus La protein	-	Systemic lupus erythematosus	ko05322	deepkoala