Detailed information of ENSLDHP00000040064.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3981167.1, protocadherin Fat 4-like, partial [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

 Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q14112Nidogen-2 OS=Homo sapiens OX=9606 GN=NID2 PE=1 SV=3
O88322Nidogen-2 OS=Mus musculus OX=10090 GN=Nid2 PE=1 SV=2
B5DFC9Nidogen-2 OS=Rattus norvegicus OX=10116 GN=Nid2 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002004 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19028
all species →		TSP1_spondinSpondin-like TSP1 domainDomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR044004
all species →		DomainSpondin-like TSP1 domainInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR039942
all species →		FamilySomatomedin-B and thrombospondin type-1 domain-containing proteinInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20920
all species →		RPE-SPONDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSLDHP00000040064.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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