Gene detail

Detailed information of ENSLDHP00000042465.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB4028510.1, tetratricopeptide repeat [Paramuricea clavata]
Species abbreviation ECAVO · all data for this species · gene families

Sequence

CDS

ENSLDHT00000046537

ATGGCAGAAAAACCTGAAAAGAAGCAACAACTGGACGCATATCTTAGCTCTGGACGATCGTTAAAAAAGAGGAGGCAGATTCAACTGgcaattgaaaattttcaaaaagcTTCGATACTGGCCAAGGAACTGGAAGATGGAAAGCGAGAAACCAAGGCAATCATTGAATTTGCAAACAGTTATGAACTAAATTATCAGAGTCAACCGGCAATTCATTATTATGAGAAAGCCCTGCAAATTGCAAAAGAACAAGGATATAAACTAGGGGAAACAAACGCATACCTTGGCTTAGGTTATGCTTATAatttgaacaatcagattccaACGGCAATTCAGCACTTTGAAAAAGCCTTGGGAATTGCAAAGGAACAGGGATATAAACAAAACGAAACACAAGCATACCTCGGGTTAGGTCATGCTTATAGGCTGAACAATCGGACTCAACAGGCAATTCAGCACTATGGAAAAGCCTTGGGATTTGCAAGTGAACGAGGTTATATACGACAGGAAACAGAAGCGTACCTTGGGTTAGGAGATACTGATAAATTAGACAATCAAATTCCAAAAGCAATTCaacactatgaaaaagccttggaaattgccaGAAAACAGGGATATAATGTAGACGAAATCAAAGCGTACCTCAGGTTAGGAAAGGCTTATATATTGAATAATAAGACTCAAGAggcaattcagcactatgagaaagccttggaaattgcaagagaacaagGATATATACAAAAGGAAGCACGCGCATATCTTGGGTTAGGACGTGTTTATATATTGAACAATCAAAGTGAAACAGCAATTCATTACTATGagaaagccttggaaattgcaaaagGACAAGGATATAAACTAGAGCAGACAAACGCATTCCTTGGGTTAGGAAATGCATGTAGAATGAGGAATGAGGTTCAACTGTCGTTTCAGCACTTTGAACAAGCCTTgaaaattgcaagagaacaGGGATATGAACAAATGGAAGCAAGCGCATACCTTGGGTTAGGGCGTGATTATCTATTAAACAATCAGAGTCAAATGGCAATTTATCACCATGTAAAGGCACTGGAAATTGCACGAAAACAAGGATAtaaactagaggaaacaaaagcaTACCTTGAGTTAGGTTATATTTATAGATTAAAGCGTCaaattcaaccggcaattcagcactatgaaaaagcTTTGGAAATTACTAGAGAAAAAGGATAtaaactagaggaaacaaaagcaTACCTCGGGTTAGgttatgcttatagattgaacaatcagagtCAAAcggcaattcagcactatgaaaaagcctcGGAACTTGCAAGAGAGCAAGGATATAAACCAGAGGAAACAAATGCATGTCTTGGTTTAGGAGAAGCTTATAGATTAAGGCGTCaaattcaaccggcaattcaccACTATGAAAACGCCTTGAACATTGCACAAGAGCAAGGATACAAACCAGAGGAAACAAAAGCATATCTTGGGTTGGGTTATGCTTATGGACTAAAGCATCAAATTCAAACAGCAATTCAGCAccatgaaaaagccttggaaattgcacgAGAACAAGGATATAAACTAGAGGAATCACTAGCACATCTTGAGTTACGGTTTGTTTGGAAATCGAGCAATCAGACTGAAATGGCAATTCAACACCATGGAAAAACCTTAGAAATTGCAAGCGAACAAGAATATGAAGATATAGCAAGAATTGCAGAATTGTCAAGAGTCACAGATACAATCAATGAAAACCACAATACTAGTAGCACTACAACATACAGTGGATCAGACGACAGTCGTCTTCATGACCAAGTTGTTGATGATATAAGTCAAACAGATGTCAAAAAAGGTGGAATCGCTGAAGAAAGAACTGCATTTGCAGAACAACTGCTAATGTTGGGAAGTTTTTGCCAAGGGAAAGGACGAAATGAAGAGGCCATCAATAACTACGAAGAAGCAGTTCAAATCGCGGTTGAAATAGATCACAATGACATCAAGGCAAAAGCTTATCAACACTTGGGAAACGTATTTACTGCAGAAACTGAGTATATCAAAGCGACTGAGTATTATCAAAAGGCACGCGAAATATCGCCATACCTCGAAGCAGGTGAGATGGAATTAATAGCATATCAATGGCTAGGTTACAACCACCTACAGGCTGGCCAGTACCAACAATCCATAGAGCATTACAACAAAGCAGTAAAACTTTCCTCGCAGCTTGGGGAACAAAAAAGGAAAATCAATGCTTACCTGGGATTAGGAAGTGCATTTACTCATTATGGCGAGTATGAGTCCGCGCGAAAGTATTTCCTAAAAGGCCTCACGGTAGCCCAGCAGACTGCTGACAAAGTTTCACAGAAAGACGCATACAAAAACTTGGGATATGTATACTACAAGAGCTGTAAGTTGGATGCAGCTGTCAAATCGTATCTTAAAGTTAAAGAAATTTCTCATGACCTTGGTAACAGAAAAGAAGAAGCCCAAGCTTGTCTCAAGGTCGGTGACATTTTTCAAGAATTAAAGCAACACGAAAGAGCCATTGAATCTTACGAAAAATCTTTAAATATCAGTGAAAAATCGGAGAACAAAGAAATGCAATTAGCCGCAATTCAGAGATTAGGAACGTTATATTTAGTTTATTGTAAAGATTATGATTACCAAAAGGCAATAGAATGGTACGAAAAGGCGTTAGATACTTTTGGATCACAGTCCATTGATCACATCCTGCATGTGAAGACTCTTACTGGTTTGAGAGACaaagaatttaaagaaaaagaaatgcaaGAGGACGCAATTCAGAGATTAGGAacattatatttaactttggcATCAGTTTGTTGCGACGATTGCGATTACGATAAGGCGATAGAGTGGTATGAAAAGGCATTGGATATATTTAGAACACAGCCTAATAATCGCCACATGCATGTAAAGGCTCTTACTGGTTTGGGAGCTGCCTGGTTTAGTCTTGGAAATACTGAAAACGCAACTGAGGCAATTCAAGAAGCTCAAAAGCTTGCTAAGAAGGAAAGCGTCACAGATTCTAACAACGTTAACATTAAGCATGAACGCATCAATTCTACAGAGCAGAAAGCATCGGCCTCATTGGTATCAGGTAAACTGGATTACGcaattgttttatcatttcCTAGTTATTTTCCTATGGTATCCCTTGGCAGCCCGTACCTCAAGTTCCTATAG

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0014433 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181 all species →	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR051476 all species →	Family	Bacterial Response Regulator Aspartate Phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46630 all species →	TETRATRICOPEPTIDE REPEAT PROTEIN 29	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003341 all species →	Biological Process	cilium movement	Interproscan
GO:0005929 all species →	Cellular Component	cilium	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07126	K07126; uncharacterized protein	-	Function unknown	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.