Gene detail

Detailed information of ENSLDHP00000043390.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: XP_028403212.1, LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 51 homolog [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Sequence

CDS

ENSLDHT00000047541

GTAGCGCGGGCTCGTCATCGCCAAAAACGTGGTCTCCTCAAGCTGTACTATGGTGTTGGAGAGGAACCTGGAGAGACGCCAGTTAATCCTTGTGATATTAATGGAGCTCATTTTAAACCTGATGCGTACATGGAGAAATTACTTAAAGAGAAAAGTTTAACTGAACTAATGGATAAGGAAACTGATATTACGAAACAGATCAAATCCTTGGATAGCGACATGCAAACATTGGTATATGAAAACTACAATAAGTTCATCAGTGCAACAGACACTATCCGCAAGATGAAAAATGATTTTAAGAAGATGGAAGAAGAAATGGACAATCTATCAGTAAAAATGTCCGCCATCACTGCATTCAATGACAAGATCAGCAACACTTTACAAGACAAGCGTTTACAGATTACGAAACTATCAGGTGTCCATGCTTTACTTCGTAAGATATTATCAAAAATCCATTGTTACATACGAATTTTTACCTCGACCGATAAACTTAGCATGTTCGCACCTTCAACCGATATTTTTAGATACTACACTAAAGCACGGGATGTTCTTCATCAATATCAACACATGTCATCGTTTCGAGATATTCAGCAAGATTGTGAAGTGATTGTGAAGGATCTTCGAGATTGTCTGAAAGATCATTTTAGGGATCCAAAGTCGACTCCCAAACAACTTACGGAGTGTGTTGACCTGTTGCTGCAGTTGAAAGAGCCTCCGAATGAATTATATGATGAATATTTAGCACAcgCTAAAGAAAGACTTGATGAAAATCTTCTTGAATTAAAAAATCAGGTaaaactggatagctctatcagtatAATTTGTAGAACATGCATGAGATCTGATATATTAGAGTTCACTGACCATGGATGTAACAACTTCTTAAGTAATATCTCGCTCGTCATTGCTTCTTATAACGAATTGTTTTGTAACCGAAATGAAGACGAGCAGCAAAATTTGGATGCGATTGCTCGAGAGAAGATAATGAAATTTGTTTTGTCACTGATGGGAGAATActttaaaattgttgaaaatcgCTTGGAATTAGAGAATGCTCACGGTGACGATCAAATGTTGGTTAGATCCTTAGATCGTTTTCATCGCAGACTTCAAGCCGTGGAGAAATTGATGCCGGAATTAGGGGTTTTGAGGACTGGTGGGAATATTATTACCAGAGCTGCTCATAAAAGAGTACAGTTCTACACTCAAGCTTTACAGCGTCAGTTTGCTGCTTCATTAACAGACCTGAGACAAACACTGGCAGCTCCAAAACATCAAAATCACGAGAAAAATCAGTCCTTGGCAGAACTTCGCTCAAACATTCACACCGCTATAGTTGGACATGTTAGAACTGCTTTAAATAATTTGAAGTCTTTTATTGGCACAGATATCACCTTCGCTGTTCGTCCATATTTTCGTGGTCCATTTTGTTCTGACGACATTCGAGAAAGCTTGGTCGTCAACCATattaaacatgttatcagttccgCTGAGGCATTTTGTGATAACGCTCGTGATAAAACGATGCACGCTCCTCCATCGCTCATCTTGCTGTTATCAAGATTGTGCTTAGATTTTCACGAATCAACCGTCGATTATCTCTTATCGTTGACGGACCAACAGTTTCCAGTCGATGAAGAAATGAGCAAAGGTTGTCTTGTTACGTCAGCAGCAGAACTTACCGACAATGCTAAGACAGCGTCTCAGCTGCTGATCAATCACTTCGTCAGAGTCCAAGGACTTACTGTGTCTCAGGTAAGGATTAAGTACCATCTTTTTAAGAGTTtaaagttctttATGATTCGTAAAAGTGTTGAAACGCGCGACTGGTTGAGCACAATCGAACCTCGTAACGTACGTGCCGTAATGAAACGTGTCGTTGAAGATATTACTGCGATCGATGCTGAAGTGGGATCTCTTTATGAAGAAGGATCCAGGAAAGCACATAGTTCAGATTCGAGCAAGTGGACTTACAATCAGCAAAGAACTCAACAACGGAATCAGTGGAGTTATACACCAAGTACTGGATTTGATCAAAGTTTATTGAGCAATATTCAGAAATTATTCTCAGAAAAGATTGAGATATTTAGCGCGGTTGAGTTCTCCAAAGTTTCAATTCTAACAGGCATTATAAAAATTACACTCAAGACATTACTGGAATGTGTGAGATTGCGCATCTTCAGTAAATTTGGTTTACAACAAGTTCAGGTTGACACACATTATCTTCAGGTTTATCTGTGGAGATTTGTTTCTGATGAAAAGCTGGTACATGTGATGTTGGATGAAGTTGTTAACAGCACTGTTCACAGATGTGTTGAGCCAGACTTGATGGAAAGCAGTGTTGTGGAAGTTATATGTGACAGAGGTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q155U0	Vacuolar protein sorting-associated protein 51 homolog OS=Danio rerio OX=7955 GN=vps51 PE=2 SV=1
Q4V9Y0	Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus tropicalis OX=8364 GN=vps51 PE=2 SV=1
Q505L3	Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus laevis OX=8355 GN=vps51 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004226 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08700 all species →	VPS51_Exo84_N	Vps51/EXO84/COG1 N-terminal	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014812 all species →	Family	Vacuolar protein sorting-associated protein 51	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15954 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000938 all species →	Cellular Component	GARP complex	Interproscan
GO:0007030 all species →	Biological Process	Golgi organization	Interproscan
GO:0007041 all species →	Biological Process	lysosomal transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0032456 all species →	Biological Process	endocytic recycling	Interproscan
GO:0042147 all species →	Biological Process	retrograde transport, endosome to Golgi	Interproscan
GO:0048193 all species →	Biological Process	Golgi vesicle transport	Interproscan
GO:1990745 all species →	Cellular Component	EARP complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20296	ANG2, VPS51; vacuolar protein sorting-associated protein 51	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.