Detailed information of ENSLDHP00000044557.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3976608.1, Exosome complex component CSL4 [Paramuricea clavata]
Species abbreviation ECAVO · all data for this species · gene families

 Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y3B2Exosome complex component CSL4 OS=Homo sapiens OX=9606 GN=EXOSC1 PE=1 SV=1
Q9DAA6Exosome complex component CSL4 OS=Mus musculus OX=10090 GN=Exosc1 PE=1 SV=1
O59821Exosome complex component csl4 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=csl4 PE=3 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006120 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10447
all species →		EXOSC1Exosome component EXOSC1/CSL4DomainInterproscan
PF14382
all species →		ECR1_NExosome complex exonuclease RRP4 N-terminal regionDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340
all species →		Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR019495
all species →		DomainExosome complex component CSL4, C-terminalInterproscan
IPR039771
all species →		FamilyExosome complex component Csl4Interproscan
IPR025721
all species →		DomainExosome complex component, N-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12686
all species →		3'-5' EXORIBONUCLEASE CSL4-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000178
all species →		Cellular Componentexosome (RNase complex)Interproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0000176
all species →		Cellular Componentnuclear exosome (RNase complex)Interproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSLDHP00000044557.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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