Gene detail

Detailed information of ENSLDHP00000046836.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: XP_028400348.1, protein retinal degeneration B-like isoform X1 [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Sequence

CDS

ENSLDHT00000051395

ATGAGGACGACCTGTCCATTTGTTGAGAAGTTTTATGTGGATGTTGAGACAAAGTACCTACCTGATGGAGGCTCTACAgaaaatgttttcaaattgtCTCCTGCACAACTTAGCAGCCAAGCAGTTGATTTAATCGATCCAGTGAAAGATCCAGTCCCAAGCAGTGTATATTCCGAAGAAGAGGACCCACTGTTGTACGTTTCTAAGAAAACAGGCAGAGGACCTCTAACTGCTGATTGGTTGAGCCAACCACAAAAATCTATCATGTGTGCTTATAAAAAGATCACAGTTGAATTTAGATATTGGGGAATGCAGAGTAAAATTGAGCAATTCATTCATGACGGTTTACGAAAGCCAATACTAATGGGTCACCGTCAAGCCTGGGTGTGGCAGGATGAATGGTACGGTCTAACAATCAGCGATATTCGTGAATTAGAGAAAGAAACACAGAGAATGTTGGCCAAAAAAATGGGGGATGTTTCTAATCCAAATTTATGCGGTCTAGTGTCAAATGAGCACGACGAAGGAACACTAAAACGTCATAACTTAATGAATGTAAAGAACAACTACGATTCGACAATTGAGTTGTTATCGCAAGAGTCACTAGATGTGAGTACAGCAGACCATGATGAAATGCAATGTGACGTTAGCTGGAGGATTGGAAGCTTTAACGATAGTGATACTGATGATGAGTTCTTCGATGCTGAAGATAATTTCAACAGTGATTCATCATGCGAAGAAAACAAGGAAACATTTTTATCTGTATCTAAAGTTTTGGATCGAAATTCTCCGTCCGGTGGAAGCGCCGAGTCACTTGACTCCGACACATCTCAGGACGACGGTCGATTTAAAAAGATCCCCGTACGAAAAACAGTTAGTTCAAGCAGTTCCATCTCCACAACGTCATCTTCAGCGTGTCGTGTCAGAGTTCTCATGTTGATCGTCCATGCAGGAAATCCGTTAGAGGTCACGCCTGACGTCAAGTCGAAAGAAAATGACTGCGAGAGACTGAGACGGGAGTTTGAGAACGTAATGGAGAACCATTATAAGGAGGGCCTTGGCCGTATTGCATTTCGATTGGTGGAATGCCCTCACGTGTTTAAAGATGTTTTACCAGCGGTAAAGGATATCACGCCGCAGATGACGGACGAACGTGCTGGAGATTCTCAGCCATCGTTAGCTTCATTCAATTTTCCTGTATCGTCGCTGCCAATTATGGCTTCGTGTTCCAGCAAATTTCCAGAAATGGTTGAAGCCACTATTACCAGAGCGAATACGGTGTATCGGGAGTTTATAAATTCTGAAGTTGGAGCTGGTTTTAATGGCGAGGTCTGTGTCGTGGGTGATTGCATTGGTGCGTTGCTCGCGTATGAAGCAATGTGTCAGGAACAATGGAGTCTAGGTAGTTTCGAAACAAACCCTTACGACCCTGTCAGCCCTGTCTCAAAACACGACAAACATTTTGACAGCAAACTGCGTGTGTGCAACGATATGAAAGATCCTGCTACGCAAAGAATACGTTCAAGCATTAGCGATACAGACATTCATGGATCACAGTACGACACAGACGTAGACTTCCCTAAGAGAAGCAATAGCATGAGTAACCAGAAGAGCGCGTCTGTAGAGGACGGTTTGGATTCAGGATTGGAAACGTATGCAGCATCCATTCCATTCAGAGTGAGAAAACTTGAATTTGATGTGTCCAAATTTTTCGCTTTTGGTTCTCCTATTGGTTTGGTTTTACTACACAAGAAACTTTCTGCGTTTTCTGGTAAAACCTCTGGTGGACCAGTGAAACCACCCTGCGGTCAGGTGTACAACTTATTCCATCCCTTCGAACCTCTCTCAGCCCGCATAGAACCACTCATTCTGCCCCAGTTCTCTCAAATCTCGTCCGTGGACGTGCCTCGTTATCAAAAGTTCCCGCGTGGTGATGGCGTGAGCAGTGACGTCATGGCCGTGATTGGCAGAAGACCGGAATTATTCCGGGAAAAACCAAGGAAAGGCGAGAAAATTAAAGTGGAAAGAACTTGCAGTAATATGAGTACGTCTAGTACTGTATCAATGGAGGCACTGGATTTCTCTCTGTCAGATGCTGCGAGGAAAGGTGTACAAAATTGGTGGGGAAGCGAACGAATCGACTACGCCTTATATAGTCCGAAACGTCTTCAACAACTACCCCTGGCAGTTTTGTGTCCACTCTCTCACATCAGTTACTGGGAGTCGAAAGATGTTGTGGCGTTTATGGTTCGTCAGATTTTCGGCGACCTCAATGATACACCAGTACAGTCATCACATGGACGGAGACTAGAGCGACGTCTTTCATCTTTTCATATTCCAAACCCGCGGGAGAAATGGCTGAAAAAAAGAACAGCTTATAAAATAAAAAATCTGGCTTCCAATCACCGTGCAAACGACGCCATTGCTTTGGAAGGTTCAGCTCAGATCGTCACGGCAAAATTTACGTATGGTCCATTAGATGTAGCCGCACTCACTGGCGAAAAGGTTGATATTTACATTATGAGTTTTCCTCCGGCCGGGGAATGGAACCTTATAGATACAGTGACTACCGGAAGTGGTGGACGTGCGTCATTCAATATCCCGGATGAGCATCAGCTCAATGTTGGAATATATCCGACGAAAATGGTTGTAAGAGGTGACCACACAACAGTAGATTGCAATTTGGCTGTACTTCCAGTTAACAGCGAAGCAGTGGTGTTCAGTATTGATGGTGCATTTTCAGCCAGTGTTTCTCTGCGAGGAAGACATCCCAAGGTACAACCAGGAGCGGTTGACGTTGTACGATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P43125	Protein retinal degeneration B OS=Drosophila melanogaster OX=7227 GN=rdgB PE=1 SV=2
Q6ZPQ6	Membrane-associated phosphatidylinositol transfer protein 2 OS=Mus musculus OX=10090 GN=Pitpnm2 PE=1 SV=2
Q9BZ72	Membrane-associated phosphatidylinositol transfer protein 2 OS=Homo sapiens OX=9606 GN=PITPNM2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004721 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02862 all species →	DDHD	DDHD domain	Family	Interproscan
PF02121 all species →	IP_trans	Phosphatidylinositol transfer protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004177 all species →	Domain	DDHD domain	Interproscan
IPR023393 all species →	Homologous_superfamily	START-like domain superfamily	Interproscan
IPR001666 all species →	Family	Phosphatidylinositol transfer protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10658 all species →	PHOSPHATIDYLINOSITOL TRANSFER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0046872 all species →	Molecular Function	metal ion binding	Interproscan
GO:0005548 all species →	Molecular Function	phospholipid transporter activity	Interproscan
GO:0015914 all species →	Biological Process	phospholipid transport	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0008525 all species →	Molecular Function	phosphatidylcholine transporter activity	Interproscan
GO:0008526 all species →	Molecular Function	phosphatidylinositol transfer activity	Interproscan
GO:0031210 all species →	Molecular Function	phosphatidylcholine binding	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000046836.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.