Gene detail

Detailed information of ENSLDHP00000047083.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3992900.1, general transcription factor IIH subunit 2-like [Paramuricea clavata]
Species abbreviation ECAVO · all data for this species · gene families

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q2TBV5	General transcription factor IIH subunit 2 OS=Bos taurus OX=9913 GN=GTF2H2 PE=2 SV=1
Q9JIB4	General transcription factor IIH subunit 2 OS=Mus musculus OX=10090 GN=Gtf2h2 PE=1 SV=1
Q13888	General transcription factor IIH subunit 2 OS=Homo sapiens OX=9606 GN=GTF2H2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006027 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07975 all species →	C1_4	TFIIH C1-like domain	Domain	Interproscan
PF04056 all species →	Ssl1	Ssl1-like	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR046349 all species →	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR012170 all species →	Family	TFIIH subunit Ssl1/p44	Interproscan
IPR004595 all species →	Domain	TFIIH C1-like domain	Interproscan
IPR036465 all species →	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR007198 all species →	Domain	Ssl1-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12695 all species →	GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000439 all species →	Cellular Component	transcription factor TFIIH core complex	Interproscan
GO:0006289 all species →	Biological Process	nucleotide-excision repair	Interproscan
GO:0006351 all species →	Biological Process	DNA-templated transcription	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005675 all species →	Cellular Component	transcription factor TFIIH holo complex	Interproscan
GO:0006357 all species →	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000047083.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.