Genomic Location: chr8:2790961...2792175
NR annotation: CAB3977826.1, E3 ubiquitin- ligase PDZRN3 [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families
| CDS |
| ENSLDHT00000051978 |
| Protein |
| ENSLDHP00000047418.1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000376 (this species only) · gene tree & orthology |
| Ubiquitin family | E3|E3 activity RING|U-box · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF04564 all species → | U-box | U-box domain | Domain | Interproscan |
| PF01344 all species → | Kelch_1 | Kelch motif | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR015915 all species → | Homologous_superfamily | Kelch-type beta propeller | Interproscan |
| IPR013083 all species → | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR003613 all species → | Domain | U-box domain | Interproscan |
| IPR001841 all species → | Domain | Zinc finger, RING-type | Interproscan |
| IPR006652 all species → | Repeat | Kelch repeat type 1 | Interproscan |
| IPR011043 all species → | Homologous_superfamily | Galactose oxidase/kelch, beta-propeller | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46344 all species → | OS02G0202900 PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0004842 all species → | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0016567 all species → | Biological Process | protein ubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K10461 | KLHL24_35; kelch-like protein 24/35 | - | Ubiquitin system | ko04121 | deepkoala |
