Gene detail

Detailed information of ENSLDHP00000047445.1 in Eunicella cavolini

Genomic Location: chr8:3916017...3939129
NR annotation: XP_028400755.1, active breakpoint cluster region-related protein-like [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000052006

ATGATCAGAAAACTGCCAGAGCAGCAGTGCAAGGCTCAAGCAGTAACCACTGTGGCACAAAGATTTTTATTAAGAATATGGAATTATTTTTTCTATTGTGATCAGGAGCAAGCAGTTGATGATGAGCATAAGCTTCACATGAGAAAGTGGGTTGTTGCTGGACTCGTTGACAGCGAGAGAGGTTACCTTGAAGCTCTGGAGAAATTAACTAAGCCAATGAAACCAATAAAGGCATCACTCACAACATCCTCTCCCATCTGTACGGTGTTTGACTTTCACCGAATTTACGACAAAGTCGAGGAGTTATATAAAATACACTCTCATTTTCTGTCCGAGATGGAGGGACGGATCGCAAACTGGAATTTGAAACAAATCATTGGAGATCTTTTTACACTTTTGGTAAGGATGGATCAATTTCCAAGCTACCAACAGTACATCGGAAATAACAAGCATGCTATGATGACGATTGAAAAATGCAAAACTAATGAAACATTCAAGAATATTTTCACACAGGTAGTGGGAGGAGTGAATACGACTttgaacactttttgcaactctatACTGTACATTCATTTCTTGTTATTTTTCCAGGATCTTATAAAATATACTCCAGTGGAACATCCAGATTATGAAATGTTACAGACGTTCATGAAACGTTTGAACAAATTTAGAACCTGTTTCAGATTTGGGACGCCGTTAGAGGTTCACAATCCGGTTTTCAGACTTCCGCTTATTTATTCTTCATTTTGCATTCTTTCTTCAGATGGACAACGAAAATACCGCCATTTATTCTTATTTGACGATTTTTTCGTGTCTGCCAAGTTAAAAGTCTCAAACAGGTATGATAAGTGCAGTGACgtatttatatttttcatgCTCACAACTGCCCAGACCGTACCAGTGACGAGCAACATCGACATCGATAATCTGAAAGCAAAGATCGCCGCCGTTAAAGCTGATATTCGTCAAGAACAAGGAATGTCAGGCAGACATCTTTCAACAACGTCGGTAACATCCGTGACGTCGTCACGCCCTGGTGTACAGTCGACCAAGAGCATGGACAGGCTGAAGAGAAAACTTGCTGAACAGGAAGCTGCATTATGGCTGGCACTACCCAGCTTACCGCTGACACTTTATCGCAGATCTGGAAAGGTGcgtttttttaaactttttgATGATAATGTTTTTACTGGTGTTCTGTATGTCGTCGTCAATTCTGGAAAAGGTTTTGTTAAACCAATTGATTGTTACGTGGTTTTGGAAGTTGATTATTATGGTCATTATGTGAGAAAAGCAAGGACAAAAATTTACAAGGCATCCCAAGATCCTTCATGGGAGGAGGGCTTTCATATCGAAGTGGAAGGGACGCAATTTATCAAAGTGCTGTGTTATAGTCGAGCGCGAATGATGGGAGATGAACTTTGTGGTCAGGGGACTATTAAGGTAGGTGTTGAAGTCCGGACCTATGAAAAGGGCGGATCTGGCCTCGTCTGTCAGAGGGGGTGCGGATTTTCCAGTCGAGAGATAGCGTTGTCATTGCGAGAGAAAAGTGACATCCCATTAGTGGTAATTGCTTGCTGTAACGAAATTGAGAGGCGAGGTATCGATGAGTTGGGCATATATCGAGTATCCGGAGTGTCTTCTGATGTTAAGAGACTTAAGGAAAAGTTCGACGAAAACAGTCAAGAAGCGCTGGTCTTTATCTCCGAAGCAGATATTCACGCGGTTGCGGGAacattaaaacaatatttcagagAGTTGCCAGATCCCTTGTTTACTGCCCAACTTTACCCGCAATTCACGGAAGCTTTAGGAATGAATGATGAgcaggaaaaagaaaaacatttattGGATCTTCTTGAACAACTTCCGCCATCGAGGAAATCAACTACCCTGTTTTTAATCGATCATTTACGAAGAGTGAGCCAACACGAGGCTGACAACAAAATGTCGCTTGGTAACCTCGCCACAATATTTGGGCCGAACTTGTTACGGCCTCCTCCGAAGGAGAAGACCGACGAAACGTCGAGCACTTCCGAAAGCATTGCCATGGAGATGGCGTCAGGCACCTTCAACGTGATGTCACAAACGTCGATATTCTATTGGTTCTTGAGGTCAAAGAGTAGCAAAACCAATTTGCCTGAAACACCCGAAATAACCCGTAGAATGTTCCCGGCCAAAAAGAAGGTACCACGGTTGTCGTCTCAGTCCGAAGATAAATTAATTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PAJ1	Breakpoint cluster region protein OS=Mus musculus OX=10090 GN=Bcr PE=1 SV=3
F1LXF1	Breakpoint cluster region protein OS=Rattus norvegicus OX=10116 GN=Bcr PE=1 SV=4
P11274	Breakpoint cluster region protein OS=Homo sapiens OX=9606 GN=BCR PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003486 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00621 all species →	RhoGEF	RhoGEF domain	Domain	Interproscan
PF00168 all species →	C2	C2 domain	Domain	Interproscan
PF00620 all species →	RhoGAP	RhoGAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000219 all species →	Domain	Dbl homology (DH) domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR000198 all species →	Domain	Rho GTPase-activating protein domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR008936 all species →	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR035899 all species →	Homologous_superfamily	Dbl homology (DH) domain superfamily	Interproscan
IPR037769 all species →	Family	Abr/Bcr	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23182 all species →	BREAKPOINT CLUSTER REGION PROTEIN BCR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0043547 all species →	Biological Process	positive regulation of GTPase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000047445.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.