Gene detail

Detailed information of ENSLDHP00000047450.1 in Eunicella cavolini

Genomic Location: chr9:8241710...8264914
NR annotation: XP_028408448.1, prosaposin-like isoform X2 [Dendronephthya gigantea]
Species Eunicella cavolini · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSLDHT00000052010

ATGAAGCTTTTGGCATTTGCGTGTCTCGTCGTTGTGGCCTGTGCTTATCCAAGCCGACTTGGTGAAGAGAAATGTACATATGGTCCATCGTACTGGTGTGAAAACTACAAACAGGCCATTGAATGTAAAGCCATCGAGCACTGCAGAGAATATGTGTGGAAGCCTAAGGGGGCTGACAAGTGTGATGAATGTAAAACTGCAGTAGCACAACTCCACACATTAGTAACCACCAATTCATCAAAGGTCATTGAAATAATGAATAATGTTTGTGCTGGACTCACCACTGGTTCTGCTGAGTGTAAATTTGCTGTTTCAACATATGGAAGTCAGATTATTAGTGCACTTACAGCAATAACATCTGATGGTGAAAAACTTTGCCAAGAACTTGAAATGTGCTCTTCCAGAGGCAAAGTTAAATACGTGGAGCAATTTTTGGTCAAAAATTTGAAAGTGAATCCTTATATTGTCGCCCTTAAATCCGTAAAGGTCGATTATTGTGCAGATTGCAAGCTTGCCTTTGGTGAAATTAAAGATCTTTTGGAGGACCAAGATATGCAGaAAGAACTGGTTGCTCTGATGGAAGAGCTGTGCAGTGAATTTGGAAGCTTTGCTGCTACGTGCAAGAGTTATGTTGACCAATACCTCCCCTTGGTTTTGGAAACACTGGCCACCATGATTGAtccaaacaaaatttgcaaCGAGATCGGTCTCTGTAACACAACACACAAGGCTGAACATATTGTGAGTGCTTTGGACGTCCTGCGACCTCAAGCGAAGAAAGTTTTAATCCCCATTATGCCTGGACCTGTGATCCTCACACTTCCTGAGAACAACGAGAAGGTTGCTGATGAAAAGTGTGACGAATGTAAAGCTGCTGTAAAACAATTGAATTATTATCTCACCAACAACGCCAGTGCAGTGCTTGATATCATGAAAAACGTGTGCGCATCACTTGGCTCCATGGCAGCTGAGTGCAAGTCACTTGTTGGCACTTTTGGAAAGATGATTATCAGTTCGATGAAGGATATGACATCTGACCCTGATAAACTGTGCAAAGAACTTGAAATGTGTCCTTCCGCTGAAAAAGAACAAATTATCAAGAAATTGTTGCTGAAAAATCTCAAAACTCATCCTAAAATCATTGCTCTTAAATCTGTGAAGGAGGATTATTGCAACGATTGCAAACTTGTCTTTGCTGAAATCAAAGATCTCTTGGAGGATAAATCTACGCAGGACGAAATTGTTAATCTTATGGAATCTCTCTGCGCTGAATTGGGAAGTTTCGCTGACCAATGCAAGACATACGTTGACGCATACCTGCCCCTAATTTTGCAAGAACTGGCCAACTTAGATGATCCAACCGAACTTTGCACTGAACTCGGTCTTTGCAACTCAACAACGAAAGCTGCAGAAAAGTTAAAAGCAACGCGCCTCCTCCCAGCTCTAAAGAAGCCTAAGGAGAGCGAGAAAGTAGGAGCTGGTCCTGAGTGTATCATTTGTGAATTTGCTATGAGAGAACTGGACAGTATCTTGGGAGATAATGCTACCAAGGAAGAAATCGAGGCAGCCTTAGAGAAAGTGTGTTCCTTGCTTCCATCAACCATTAGGTCTGAGTGTGATACATTTGTGGAGGAATATGGACAGGAAATTATCAATCTGCTCTTGCAAGAACTACAGCCTGACCAAATCTGTACTGAGCTTGGTTTGTGTTCTTCAAAACCTGCCAAATTTTCGTTCAAAAAGCCAACTGACGAGACATGTGATTTGTGCAAAATGGCTGTCCAGTATTTGGAAAACCTATTGGAGTCCAATGCGACCGagGAAGAGATCAAGCAAGCCCTTGAAGAAATCTGTAACCTGCTTCCTGCTTCTCTGAAGACTGAGTGCTTGAACGTGGTGGACAAGTACACTGCTGATCTTGTTTGGTTACTCACTGAGTTTCCTCCATACGCGGTGTGCAAGCTTCTTAAGTTGTGCACAGCTTCGAAGACACTGCAACTCAAAGATGAATGTGCGTTGGGTGAATCGTTCTGGTGCGCCAGTTATAAGAATGCTCAGAAATGCAACgCGTTGGAGCATTGCAACTATCTCGTTTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O13035	Prosaposin OS=Gallus gallus OX=9031 GN=PSAP PE=1 SV=1
P20097	Saposin-C OS=Cavia porcellus OX=10141 GN=PSAP PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002623 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02199 all species →	SapA	Saposin A-type domain	Family	Interproscan
PF03489 all species →	SapB_2	Saposin-like type B, region 2	Family	Interproscan
PF05184 all species →	SapB_1	Saposin-like type B, region 1	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003119 all species →	Domain	Saposin A-type domain	Interproscan
IPR008139 all species →	Domain	Saposin B type domain	Interproscan
IPR011001 all species →	Homologous_superfamily	Saposin-like	Interproscan
IPR008138 all species →	Domain	Saposin B type, region 2	Interproscan
IPR007856 all species →	Domain	Saposin-like type B, region 1	Interproscan
IPR008373 all species →	Family	Saposin	Interproscan
IPR051428 all species →	Family	Sphingolipid Activators and Surfactant Proteins	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11480 all species →	SAPOSIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006629 all species →	Biological Process	lipid metabolic process	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0006665 all species →	Biological Process	sphingolipid metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12382	PSAP, SGP1; saposin	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.