Detailed information of ENSLDHP00000047875.1 in Eunicella cavolini

Genomic Location: chr8:17337833...17339958
NR annotation: CAB4037231.1, E3 ubiquitin- ligase NRDP1 [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000376 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02176
all species →		zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF13923
all species →		zf-C3HC4_2Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF01344
all species →		Kelch_1Kelch motifRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR006652
all species →		RepeatKelch repeat type 1Interproscan
IPR015915
all species →		Homologous_superfamilyKelch-type beta propellerInterproscan
IPR001293
all species →		DomainZinc finger, TRAF-typeInterproscan
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR051746
all species →		FamilyKelch domain-containing protein 8Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46260
all species →		RING-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10461KLHL24_35; kelch-like protein 24/35-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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