Gene detail

Detailed information of ENSLDHP00000048394.1 in Eunicella cavolini

Genomic Location: not available for this species
NR annotation: CAB3979408.1, cytoplasmic polyadenylation element-binding 1-like [Paramuricea clavata]
Species Eunicella cavolini · all data for this species · gene families

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R733	Cytoplasmic polyadenylation element-binding protein 1 OS=Pongo abelii OX=9601 GN=CPEB1 PE=2 SV=1
Q52KN7	Cytoplasmic polyadenylation element-binding protein 1-B OS=Xenopus laevis OX=8355 GN=cpeb1-b PE=2 SV=1
Q91572	Cytoplasmic polyadenylation element-binding protein 1-A OS=Xenopus laevis OX=8355 GN=cpeb1-a PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001456 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16367 all species →	RRM_7	RNA recognition motif	Domain	Interproscan
PF16368 all species →	CEBP1_N	Cytoplasmic polyadenylation element-binding protein 1 N-terminus	Family	Interproscan
PF16366 all species →	CEBP_ZZ	Cytoplasmic polyadenylation element-binding protein ZZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038446 all species →	Homologous_superfamily	CEBP, ZZ domain superfamily	Interproscan
IPR000504 all species →	Domain	RNA recognition motif domain	Interproscan
IPR012677 all species →	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR032292 all species →	Domain	Cytoplasmic polyadenylation element-binding protein 1, N-terminal	Interproscan
IPR032296 all species →	Domain	Cytoplasmic polyadenylation element-binding protein, ZZ domain	Interproscan
IPR034819 all species →	Family	Cytoplasmic polyadenylation element-binding protein	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR034977 all species →	Domain	CPEB-1, RNA recognition motif 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12566 all species →	CYTOPLASMIC POLYADENYLATION ELEMENT BINDING PROTEIN CPEB	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0000900 all species →	Molecular Function	mRNA regulatory element binding translation repressor activity	Interproscan
GO:0003730 all species →	Molecular Function	mRNA 3'-UTR binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006417 all species →	Biological Process	regulation of translation	Interproscan
GO:0008135 all species →	Molecular Function	translation factor activity, RNA binding	Interproscan
GO:0043005 all species →	Cellular Component	neuron projection	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0045182 all species →	Molecular Function	translation regulator activity	Interproscan
GO:0045202 all species →	Cellular Component	synapse	Interproscan
GO:1990124 all species →	Cellular Component	obsolete messenger ribonucleoprotein complex	Interproscan
GO:2000766 all species →	Biological Process	negative regulation of cytoplasmic translation	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSLDHP00000048394.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.