Gene detail

Detailed information of ENSNOVP00005005245.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: CAB4031750.1, histone-lysine N-methyltransferase PRDM9-like, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSNOVT00005005245

CTGGGGACTTTCAGGGGTACCTTTTCGAGTAATTGTTTCTTTCTGcattttggttaaaagtctccAAGTCGAAGGATCATTTACTGGTATGGTAGACGAGTTCGTGTGACCAAAGTGAGAGGTTTCGCCAATGTTACTATAAATACAATCCTCGTTCTCAGTGACGATTTCAACGCTATTTTTCTTATACTGTTCTTCAGATTGCTGACCTTTATTGTCATCGAGATTAGATATAAGATATCAATATTTCGCTCTTTCCAAAATGCACTCATTTTGTCAATAGCTTCAAGGAAGGGAACTACGTCGAGGTTATTGTACCATATCAGAAAGTCACGAAAAGTTTCCATATTATTATCATCGTTCCACATGCGCTGGCAATATTCGTACTGTTCATTTGTAATGGCAGTGTTGGAAAGTGTTGAATGGAATGCTTCGGGATGAGGTAAGGTGTGGAAGTTCAACTTGTCAAGAGAGTCAACCCATTTGTATGGAAAATATCCTTTGGTCTGTGTGCATTCGTAGGCTTTCAGAAACTGGTCGTACGAGAATCCAGGAGCCAAGTAGTTTGTAATATCGAGAAACTTCAAGTGCAAGGTTTTGAGACACATGTGGTTATTGTTTCTCTTTATCACAAACTTAACTTGCTCCTGTTTCACGAGGTGGGTGAAGAAGGGGTTTTTGGCAGCGTTTATGTCCTACTTTCCCGAGTTGAATCCAAGGACGGGTAGCTCCATTAGGTATAACTCCAGTTTTTCTATTAATTTCTCCAAGGGGTGGGCCTTTTCATCTTCCTCATCCGCTTCATTTACCTAAAACATAAATACAACGTtaagattttttcaaaagtgAGAATTTGAGATTATAGTTAAAATTACCTCATCCAACTCATCTTCGTCTACTGGGCTACTATCCCCCTTGTCTTCGCTCAtctgaaacaaataaaaaattagtaCAAATAGTACAAGGTTTGGGGAGAAAGTGTATATTTTCTTTACCTCAGTCAGTGCAAGGATGCATTGCACTATGTCTTCCATGTCATCACCCTCTTCACTTGTTTCAGATACCTGGAAAAACAGATCGCAATAAGAACAAATCTTAACAATATCTAGTTGGTTAAATGTACGGTATACCTCACTATTTGCGATCCTTTGGTTGATTTGCTCAAAGACATTGGCGAAACAGTCCAACAATAGCACATAACTTTCTTGGCTGACTTCAACCAAATAGTCTACgaattgttttatcatttctCTCGAGTTGCCAGATGAGACAAAACACTTGGGCTGATCATAACCAGGTACATTGGAGCATACGGAGACGCTTAGCTGTATATGCTCAGCTTCCCATGCAAGCTTCGTAGTATTCCTCGGGTGTTGTGTCTCTTTCTGAAAATAACACTCAAAGTCGAATGTTGCGCGATAAGGGAAGTATTTCAGGTCTTCAGGGATCTGGATACCTTCATCTTCGAGCAAGTCAAAGATTGTTTGTGGAACTTTATATGCACCACCAGTGAACACGTGACGGATAGTTGCTTCGCATGTTCTCTTGTGTCGATTGAGAGCCCGCGCTGATTTCCATAACTTGTCACATTTACAACAACAGTAGGATTTGCAGTACATGTGCAAGTTCTTGATATATATGTGTATCACGTTCCAAATTATGGGGGTGACATCCACGGTGCAGAGCCAAGCAgcgaaaaaaacaaagtttgtccTTGCAAGGTAATCCGGTGTGTTCGTTACAATCCAATGAGACGATGGCTGGAGTCTCTAGGATGATCACATAGTTTGGTGACGTAAAATGTGGCGTTGGTAATATCCATCACCACCCATTTGGAATTAGGCCGTTGTTGTTTGGCCCATTCAAAAACATCCATGTTTTCCAACGCTGTACGCACTTGGTCTAAATCCTCGCGGTTATGTATTTGGAATGGGGAGTCGAAGACACGGTTGTTGTTAGCAGATGAGTGGTGATATTGCATCTGTTCTGTTTTGTTGTTAAACAAAACAAAGC

Transcript

ENSNOVT00005005245

Protein

Uniprot

Gene family

Uniprot term	Description
P0C6Y7	Histone-lysine N-methyltransferase PRDM9 OS=Rattus norvegicus OX=10116 GN=Prdm9 PE=3 SV=1
Q96EQ9	Histone-lysine N-methyltransferase PRDM9 OS=Mus musculus OX=10090 GN=Prdm9 PE=1 SV=2
E9Q3T6	PR domain zinc finger protein 14 OS=Mus musculus OX=10090 GN=Prdm14 PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-C2H2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan
PF12874	zf-met	Zinc-finger of C2H2 type	Domain	Interproscan
PF21549	PRDM2_PR	PR domain zinc finger protein 2, PR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR001214	Domain	SET domain	Interproscan
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24393	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala