Gene detail

Detailed information of ENSNOVP00005008482.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: XP_028418942.1, cartilage intermediate layer protein 1-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSNOVT00005009458

ctctacaggacgagccattgccgcttacgcattgtgcgcacgctcactgcttgcagtttgagcgctctggcatggttttggtgtcccacatttgtgaggcatcaaaggtgactgtataagcagtcactttcgtcctgctcatcagcgcACAATCAGACAACGTAACGAAATACATCCATTTGTTGTATATCATGTACCCACTCTGACCTTCGCGATACCATCCACGCCAACCGTTACGTAGTCCTGGAACTAATAAAATGGAAGGAATGTGTGTTGGAATTACATTTGAAGAGATTGCCTATCAACCAAGGAGGTACTTTCCAATAAATCATGTAATACTGTATATACAGCATGAGCGATCGTATTGAATAAAAATATGGGATGTAAAACATTACGATTTTGATAAATCGAAATCGGGAAAATGTTGTACAGTACAGTCATGGCAGAAATCACAGAAATGcggggcgagggtaaCTAATTCCGcatggctatttacacccgggaaaatgcgaacacaacgaagtgcaaagttcatcaatgatagtttaaaacatggATCGttttgccatagttaacatgacgcgagcaaagtgagcctgcgttcagtattgatataacccgaaatacttgcATGGTTGGAATTAAAGGCGAGGGGtggctgcaggcatgtatttctagcttagatCAGGAGAAACATTTTAATAGGGAGAATAATTTCAAATTTACAtgtaatttttgcattttttacaGTATAATAGTCATAAACGAAGTTGTTAGAGTTGTAAATGTTAGGAAGTATTTTCGCccgattttcaatttttcagcggagaggggggggggggaggggagggttGCCTTCGTCTATGCAACCTTCACCTTGTTACCAGAGTTTATAAACTCATGCATGGGACGAAATACTTGTTTTTAGGTGGTTTCTTTTATTCGGTCAcgaattatttattaaattgtAGGAAATTGTCTGTTACTGCATTATACAATCATTGCAAGATTTTGCTGTGAGATGactttgatgtattgaaataggTCAAGGTCTTAGGGGTATTTACATCAATCCGGATTAAGTTTCAATCCGAAACGAACTCATTCCGATTCTGTTGAAACTATAGATGAttcaattatatttgtttacatgaatccggggAATAGGTTGCAACTGATTCCGGATTGTGTTCATTCCGTTTTTCATTCCGGACTAAAATCTTGATCCGGAATGAAATGTCGATCCAAAATCATGTAAGCACGGACGCCACGTTTAGAATTTAAATTCTCACAATTTCCAACATGTCTTCAATCTTCAAATCCAATTTGGCATGCAAACACGAATTGAAAGCGATCCGGATCAAAACCCAATCCGGAATCATGTAAACTACtccttaaataactcattaataattcatgaagaaaacacaaagaaaatcacaaccgtgtcggtggtgttatatgcgataaaatttcatgttaatttacatatactttagctttgattttctcggcttaaacaaagtcgattttaaaaattactccgccaatgaactcataaacatgggtcgtttttttaagccatttaaagcacttgtagtcgtgctttatcagatataaaatgctcggcttgcgcctcgcattttatatctgataaagcactcctacgcctgctttaaatagtacttaacaGTACTCGGTGAAATTTTTGGTAACTCTGTGATTGGAGAAAGCACATTATatagaaataataatatttttataccACGTGTATCTAATCAAGGTCAGTTCAGATTTTCAGTACAAGACTAAAGGTTCCGTCACCAGTGTAGCCTATTTTCGACAtatcaattcttgggtttcacaatgcaaatatgcagtaaatctgattGGGGGTCAACCTGAAATGTATTGAAGTTTATgttgtactggagagagcaaatgataggaaattccacgtatttgctacgaaacacgaggccaacgcATACACTGAACATTTAATTTTCTCCCATGAccatgtctcgatttagagttagCCCCCGAAtgtatgacgtcacatgaaacccaagaatatccACACACTGTGCAAGGTCATTATTTTGAAGTTACGTATGGCACAAGAAAGGCCCGCGAGAATCCATTTGCTACTGTATCATAGACCTTGGGAATGAGGTCTAATTTATAAGTGACTCTCGTGTCGAATTTTCGTCggcgcgtcaaatgcaatttgaagaatagataatgagatgtattACGTATTAATTATCTagtgtttgaattgcattgaaACAACGAAAGTTCGCTATAAGAGCGCCGTATAAACAAAACCTAAAATTCATCGGCTACTTGAGTATTTGCGCAGGTATTTGCCATAGCCATAGGTGCGTACACCATTTAATTGCCACTTCACCTTTGTAAAGCTTTCTGAAATTAGATATTTCATGCCACTAGCGATATCCAAGTTAGCGAATGCTTCCAGAATATTGTTTTGATCACCccatacatatatatttgttgtTTTCTGGTATGTACGATTACCATGTATGATACTACGCTGTGAACTTATTGAACTATAGGATTATTGGTTCTAAAGCGAATGCGCAAATATATCATATACACTTTTCAACAAAGAAATGTGACCGGGTATTTAATAATCGCTAAACTTTTTCATTTATGGCAAGTTTACAGTATTTCTATGTACGTCAA

Transcript

ENSNOVT00005009458

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00090	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039675	Family	Cartilage intermediate layer protein 1/2	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR008969	Homologous_superfamily	Carboxypeptidase-like, regulatory domain superfamily	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15031	CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24436	CILP; cartilage intermediate layer protein	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala