Gene detail

Detailed information of ENSNOVP00005009065.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: CAB3981631.1, Hypothetical predicted protein [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSNOVT00005010064

tttgccCTACACTGGCACCAACTCTTTGAATGTCCTTGCATAAGATCAATTGAATGATTATATTGAATAAATTGTTACAACATATTATAGTTATATCctacatatttaaatatatatgtttacacCTTCATTATAGCTTAATTAGTAAAGTTCGTCTAATTTCTAGAACTCTTCTGTAAGTGGTGATAATTTGGCAGCACTTTTGTTAAGAAATCTAATTGCAATGTTTGGGCAAGCGGTCGTTCAGACTGCACCAACTTTGGATTTGCActccaaaatattattattgCCGACTTTTATCGCTTCACAATGACTGCCAACTTCAAAGAAATTGTTATTTCCGATTTCCATGACGGTAGAATCGCCTTCATCATTATCACCCTGGTTTATGATGCATGTTTGTTCTTTTACGTTCTAATAATTTTAACGACTGTTTTGTGCAATTAAATACGTTTAAAAACCtttgaatgtttaaaaaataggaAATATTTTGGAAAGCATTTAGCACCTTCCCCCCCTGATTATGTGTTATATGTGATGTTTTGTGATGAGAATTACATGAAGTATCACAGTGCTGCCTATATTGTATTGTGGGCTCGTTGACAAAAAgtcgaaatttcaaaaaatggGTTACAAACTTACAAACGCAAAAACTTTGCTTATTTTTTATGAGGAAAATGCACAACTTATTCAGGTCAATATTCTGAAATTTCTAAATTATTAGTACTAATTAGGTTAATCTTAATTAATTTTGGTTAACTGTTTCTGAAGTCAATTACTTGTGGTAAATTAGTtgttaAAGACAATGCAGTAGTAAAAGACTCTGTCATATGATGCAATTTGTCATACAATTTCTTTCAATGTGTGACAGAGCTAGCCTCACAAGAACGGCAGTGATTCAAActgcttaaaaatatataatattgacAAGCTTTGGGTGCATTCATGCCATTCTGCTAAATTTCAGTTGCTCCAAATTCTGCTATACATCACTAATTCACACATCACgcacatgcgaCCATTTCAGACTTtgtatatttgtgatgtttagtacactttgagatgaaatgcaatatattttcatagagaaaatgttaattttgtattttgaaacaaacaaaatctcatttgcattgccttaaatgatgTCAGTTCCAGCATCATGAAGATGAAGGTTTACTCTACCTGACCAAAAATtctcacttgttcaaggttgttgaaaacaggatgcaacaacgttgtgctgcccacattgttcatagttgtcaacaatattgttcagcattgttgaacctgaatcagcccgcaatcaggGGTGCGTATATAATATTGCCTTTCatctcaaaatgtactaaacatcacagaTGTAGCACATGATGTGGttagcaaaataatataattgaatatGTGGATCTGTTCATGACCACTGGTTCTGCTGATGGTACCAGTAATGTGCCATATGGTGAGTAATATACTAAAACTTGTATGCAACTAGGAAAGTGCAGGAGACCAAAAGTCAATTTTGAGTTTTTTCTGAAACTTGTAtcctgagttttaggctctaaatggAAGTTACCCagcacgccccccatggaaatcagcctactaatggttgttggggctaGGTAATGTCTAGTTTGGCCAACGCATGAACAGCTAAGTCTTTTTACGCATGTGATGAGAAAGGTaccgatttttgcataaacctggacaataacataaataacgAGCTCTGTTGTTTTTATGTGGTGTATGTACAaattatatatgatatattcataatagataattccccttatccaagAATTTGGGggtttttgtctggatttgtttAGATAAAAAATTCTATACGGGGAATTGTCTATTTGGGAGAATCGAAATAATTgccaatttcatttgatttttaGGTGCGAATGTTACTATGAACACACAGTCATTGGGTACTAGCACACCACCTACAACAGGATACCCaggaaatattaatcaattAATGACACCAAACATGCCAGCAACAACTCAGTCGATGATGCCAggacaacaacaaaatttcatgcctaaCATGCATCCGACACGTATGCAACAACAAGGACAGCAGTTTATGATGCAACAGGGTGTTGGGATGAGTTACAACAGACCTCCTGTACAAATGCACCCGTCCCAACCAGGTCATCACCAACAACAGTTGAACCAGACATATCCAGGAAATCCGGGACTTGCGGGTCAATCTGGCATGGTTGGTTATCAACAGGCTGCATCTTATGATCCATACAACTCAGTGCAACAACATATGAGTGCGGGATATAGTAATCCATATGCACCTCAGTAACCAGATATGTATATAGTGtagttcattacaaaatattctCTTTAATATATGCCTTCACAGTAAGATTATTTGCCTAGTCAAAAATGGTAAAAACGTAAAGGGGTCAGCATTGtcaatttcttgacaaaatgcTAATGGTgtaatcatttttattatatggcttttcaaaattctctattctgatcatattctgattggttgacaagcggtccgtaaaaacccatatccggaccgtggtccgtattttccgtatctggactggtgtcccggatgtcgtttatctggcgggaagttttaagttgtgaatagtggttttcttagatgtttcacccccttgcaaacttgtgtgtcattaaaatttacagataaaaatttcaaacaaccaaattgtttttgattcagcatgcatgcctaccgtatattgttacccagtgaaactgacgatagccgatttaattcgcgcgaaaag

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14951	DUF4503	Domain of unknown function (DUF4503)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR053054	Family	DNA repair-scaffolding protein	Interproscan
IPR028032	Domain	Domain of unknown function DUF4503	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR34347	DNA REPAIR-SCAFFOLDING PROTEIN SPIDR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000228	Cellular Component	nuclear chromosome	Interproscan
GO:0000724	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005654	Cellular Component	nucleoplasm	Interproscan
GO:0070202	Biological Process	regulation of establishment of protein localization to chromosome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26129	SHLD2; shieldin complex subunit 2	-	DNA repair and recombination proteins	ko03400	deepkoala