Gene detail

Detailed information of ENSNOVP00005015533.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: XP_015758992.1, PREDICTED: RNA-directed DNA polymerase from mobile element jockey-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSNOVT00005017550

GGCTGATGACAAGCAAGATGACAAGAACTAAAGCAAGCGGGACGGCAACACCACGACAACGGCAAAAACCATTTCGTTGAATAAGTTATTGTAcagaaaatttgtcgtatattatccatcgaatgaagttaatacagcttaagaaggacaagggatggctttatggttctactgaCTTCTAGTGAGCGAATTTAGTATAGCACCTTCCGCGGCTTCAAATTAAAGGGCAAGCGTTGTGTACAAagcgtgaaaatctgtggttttgcgttgtaaacagagcgaggacgacatggagagctcccatgggatttgaattattcatctcttttctccaatattttgaattcattgtattaacagccgtcgccgtCACTTTGCCGTCCTGTTTGCTTAaaacccgttttccactcatGTATTttgccgccgctggcgaaattttcgctagcgaaaaatttatttagttgttctttcgtgccgtgaGAGTataaggtcaaacagaagatgaaaattttcaacgactggactgGCAGAACAAGGTtattcagcgacgcatgaacgtaaaaaaaatatttctatgtcaaaatttttcgccgccggcggcgaaatgatggaatGGAAAAGTTCCCTAATGACGATGGGGCGGAGGGATCTAAATTAAAAAGAGCTAAAATTTGACGACATAATCGTTGAATGGCCACTTATGgttaaaagaaatatttccacttTGTGCGAACTCTTGCTTTCTCAAGCTATTATGGGAATCCGTCCGTAATTTAGAATAACGCTTGTTCATGGCGGCAGAAATTAGAGAGCAATGGAGCGATGTCATCTCTGCAATATAAAGTTATGACTCTAAATTCTAAACTTTAAAACTTAGTTGAATTAGGAATTCAGGACAGGCCATagtgacgtttcgtcttaacttaagacatcttcagactaaatggattatacttgcaagtgatgaaccaggcgggaatcgtaatcgtagtataaagattaatgcccagcataacgtacgcaaaagagccatatagacaataatatagacataaaatttatttagaagtactaacgtttcgtctttaacctaagacatcttcagagtaaatgagtatagtatgacaataagttacaaatatgaataaattactatttacaatatcaaattacaaggtaataggaatgcggaggatggagggggaggggaagttaaaggagaaggggggggggggggttaaagtaaagaagtcagaggagtggagttttgagatgagaagactttcacggacgagaagttcatctggagcggaacaggacgaaaggatcttaaaatcatcaagagaagcagtatggcctgagtgactcagatgggaaaagatgctcgtaagttgaggactgctactcgtcttaccagttaaggcagaaatacccaggtgttcagagactcgtgtatgtagatggcggaccgtttggcccacatacgacgcggaacagcatcgacacttaaaagaataaactacacaagacctcaaagcaaggggaattttgtccttaaacatgaagaaattggaCAAACGTAGAGTGGGACGAAAAACGATTCTGATGCTTATATGTGGGTAAGCTACAGAGCAAAGGCGTTGAATTTGGGTACGGATTTGGAGAGAGTGTGTTCCGGTATACGGGAGACAAAAGTAGACCACTTTCCTTGATACAGAATGGATTAATTCCTTGGGTTGAAAGGTTTGATCAAGAAAGAGTCGAACACAACGGTCAAAAAGACGAGTAGGATAACCGTTCTGGTTgaggatttttctaaaaaactcaatctgagcatggaaattctcatagctagagcaaatattgaaaaagcgaacaaGAACTGCATGTTGTAGAAACAACATCcattacacacatacaaacgcATAGACATTACATCACACATACAAAAGCACTagaattaatttaaaaacagcatgtaatagatataaagtttgttcgttctcggcaaccaggtataatatcactcatgtcttactcgttactctggtttgtaaaaataaatacagagctccttcgaggtgtattcacgacccaacgtttcgacactccagtctagtgtcttcatcaggggtgatctaaagttacaacgcggcttcttatgagggtgatatatctggAAACTATgacagtaagaaagttgatCTAGAGGAGGATTTCTACTagaaagatatattacatttctacCAAAAATCATATATTTGGGATTAGTTGCACTTTAACTATATTTTTGcttcaattttattattttgatacAGAATTAATCGTCTGCgcatgttaaaatattttttatttcatttcgtTTTCCAGTTTGATCTGTTATGAACTGCCTTCGAAACTAACATTAGATGGTTTCCTTAAGATGAATACCCACGCGATTACCGAAGAGACAGTGTATTATATTTTGAATGACCTTATTGAAGCAATTGATTATctttcttcaaaacaaattgttcacCACGCTATTCTTCCCGAAAACGTCATTCTTATCGAGTCTTCTCAGGTAAGGAGAatgatttttttaactttttttaaatgcaaatGGCATTGTTTCATGTAAGCTATTCAAGTGTATTCAAAATCTTTAAAGCTTGTTTTCTCGAAGAGCGTTTAACGCCATTTCAAAAAGTTTTCTGAGTTTATTACTCAATCGTTTCTTCTAACATTTTCAGGGTTTATATAGGAATACAAGCGCCATGCCATGAACCTGAATAACATTACATATATGCATTGTAGCCGGGGGAAAATACAATTTAATGAAGCTTTTTTCTCTTAATCTTGAGAAAAAGATAAAGCCGTCCAATAAATTTGCggtgtttaaaaattactttaaaCATCTTTAATTTCATGCAGGCATCACTTTCGTTTTTTTAGCTTGTAGTAGAAAGCACTGTCCTTGGAGGACTTCATGCAGCCAAATTCGTAACCCCCTCATCTGAGGAAATGGAAACGAATAAAGGACTTGATGAAAAAAATCTGGAAGAACTGGAAACGAATGTGATATCATTTGGAAACTTGATAAAAATATTACTTGACGTTTGCCCAACACTCGAAAAGTTCTCCGAGGTAAGTCATGGTATAAAAATTCTGATCTTTTTATATTCAATATGACAACGACTagcaaagtacactgatttaaagctaataatatttattatgtctgagggagagttgcaaaatccaaacaaagatcaaaagaagatagagccatgtggcatattacgagttactaacgagttaccaacgagttaccaacCTATTGTCTGCTGGGTTTTCCCATAACGCTCTTTCAAAATACTAATGGCATTGTCATAGTTCGCGCTCGTTAATGTTAATCCCTTAATTGCTCGTGATGCACTCCCTTCGAGCAATGACTGTAGATAATTAAATTTGCTCACGTTAGATATATTTGGGTTACTATGAATTGCCGAATCGAACGAGTCCCAAAAGGAATTCCACTCGGTTACTCTTCCACTGAACTTAGGCAATTGTAACTTTGGAAGCTTTGGTAAACTAGCAGCTAAACGTGCATTCGAGGTACTTGAATTATTCGTACTGCGTCTAAAATTCTGTCAGAAATCTCAGCTGCCTCTTCGATTTCTCGTTGTATGTCGTTAACGTCGCATATGTTTAAGATTTCATCGTCAATTTCGCTTAGTAACTTCAATTTTGCTTCGAGTTGTCTGGCAATTCCCTTGCATTTTTCTAAATTATCACTTTCGGGGTTTCCTATCAGTTCAATCGCTTGTTTTTCAAGTTTCGTGCACACGCCACGATGGCCTCGTCGTCTTGCTCGTAATCGCTccaatttttctttcaattcGGTTGACATTTCGTTCGGATTTTTGCCTCACACGTTAGGGCGCCatgtaaagaatatttgttgtcgCTCTTCGCTCAAATGAGTGATTTCTATTGCATTTAAAGCACaccaaacaataaaatataaatataatcccaaaccaaaatatacacaaaaatacagtacaaaaatCTGTCGACCTAAGCAACTTAGCTACTTCCGCTCACTGATCTCTATATCTACTCCAGTAATCTGAATGTTCTTCACAtcgattttataaaccatttccgatcaaactgtttcaaccgtaaacatacatgcaaagaatcccacgcataccgtagtggtagcttgcaaacagcagtacttgaaccaaaactttgaaataacgaaattattaacattcatcaaacgaagaaaacgacgtacttaccagtaacaatactcgactttatcacagaatgaaggacgcgaataattctaagaatataaatgaaactaattgtatttgcaaagcatccgacaatgcattgttgttgttcttaatatatgcaaattattcttgtaaaatattacgtgaagtatttcgcacgccagcttttcgcactttttgtgaattt

Transcript

ENSNOVT00005017550

Protein

Uniprot

Uniprot term	Description
Q9NBX4	Probable RNA-directed DNA polymerase from transposon X-element OS=Drosophila melanogaster OX=7227 GN=X-elementORF2 PE=3 SV=1
Q95SX7	Probable RNA-directed DNA polymerase from transposon BS OS=Drosophila melanogaster OX=7227 GN=RTase PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20700	Mutator	Mutator-like transposase	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049012	Domain	Mutator-like transposase domain	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan