Gene detail

Detailed information of ENSNOVP00005015534.1 in Eunicella verrucosa

Genomic Location: not available for this species
NR annotation: XP_028406662.1, (E3-independent) E2 ubiquitin-conjugating enzyme UBE2O-like [Dendronephthya gigantea]
Species abbreviation EVERR · all data for this species · gene families

Sequence

CDS

ENSNOVT00005017551

tccgatccgatagAAACAGACAACTGTAAGCAACTCCTTTCAAACCAAGTGGTGCCTGTGGTGGATTATGTGTTGGCACACTCTATACAAACACGTTAGAAGCAAGCCAGCGAAATTTTGCAAAACCCAGAAGACACAGATTTCGAGTTCAGAAAAGTCCCAATTCAACATGCTTATtgaatgctgattggctaagagccgtgttgatataactctatgtcaacacggaaaatttcccgccgctctaaattcaaacgcgtatcgcccaaaatgtgctagctatattataaaaaaaatataaaacattttccgtgttgatatatagttatatcaacacttgtgaaaattGTATTCAGCATTAAGCATTCGGCTTCAAGTATTCAGTTATATAACACGATATTCTGTTTGAAAATGTCGCGTGCACTAAAACAAGACGATGTACTAGATTAATAGAGGGAGGTTAAGTAatggcttaatagagagggagTGCAAGCTGAATATAGAGGGGGGGACCTTGACAAAGAGGGGGTGGGACCTAATAGAGGGGTTGGGGCTCAATAGGGGTTGGGGCTCAATAGAGGGTGGGCTCAATAGAGGGAGTGGGGGCTTGATATAGAGGTAGGTTGGAACTCGATAGAGGGGAGTGGGTGACTaGAGCAGCATGAACCAGAGGTCACAAACGACGACAATGATGTCAATCCTAGCTTGAATGATACAGAGCAAATTGGAAATAGCAGTGAGATTTTGAGTGAGAGTGATGAAGTGATGAGCTATCCAACCAGCGAAGGAGAATATTACAAGATTAGTACTATACTATTGATTTATAACTATAAGAATGGaaaaaattagataaaaactatttacaactaaaACTACTTATATACCAAAACAGGATAATCCATATTAAGAACTACGATTTCAATGCGTTATATGTAATAAAACTGTTTCGATAGCGTTCTGTCTTAAATGTCACATTAAACCTACGCTTGTTCCTGAGAATGGTGTCAGAGTTATTACACGGAGGGAgtaatttatgtaatttatgaTCCTTATTAGACGCTATGTCTCGAAACAGACTTTCTGTAAATTCTTGTCTTCTGGCATAAAGAGGTTGCAGTCCTGCAATAGACAGAGCTTCACTGTAGGACGTCCATGGGATTATGATTCGCAACGCTCTTTTCTGAATTGTGATTGGATGTTTCAAACTTTAACAATTAAACTACTCACAAACCTGACAAAAAGATAGGCTTCTGTTCGTTTTTAGATTTCTCAAATGCTTCTTCTCCCCAAGGATACCTGGAAAATGGGAAACATTGTTTAAACCAACATTTAAACCTACATTAACACTTGGCCTTTTAGAGTGTGTGTGTTGCCTAGCTATCAgattttaaaaacgaccgagttCAGAGTTACCTACCCAAGCAGACTAATTAACCTCTATGAACAACTGTTTCTGCTGAAAAATACACCAGCAAATATCTAAATTATCCATAggttttcagccaatcaaaaaacAATAATACAATGTATGAATAATATGTAATTAGTTGCAGCTTTGCAAAAATTAGTTGCACAAAAATTGCATGTCTGACTGGCCCAAGAAGTGTGATTCATTGCACCACTACCCTTTCTTTGCTGGGATGGTTCTacacaaaagttctactcactacctaaacaacaaaggacctttgctcgaaacatcgaatctgtttgcattgtttaggtagcgagtagaacttttgccccccccgaacacaaagttgaaaatatatgaaaacattaaaggaggcagGATCTCAGtataacagaatcagcccggtcaaccgggccagcccacctcatatgaGGCCCTTAAATGCCTAAATGTATCTGTTGACATTTAACACCAGCTTGAGAAACTATAAATGCGTGGAAAGTGCGAGAGATAAGGCTTTTTGTTGGAAAATTCGAATAAAACTTGTTTGAAACTTTCCAAAGCCCGAGAAAGAATTGAAAGAACATTGAAATTTTGCCGCATGTGAGTTAGGGTGCGAGATACTTCATGTCACAAAAAATATGGAGGTTCTAGTACAACTGTATTGCGAGTGCAAATTTCGTTTTGGAGACATTTTTTAACTGTTAAAAACCCCTCAAAATCATAACGAAAATTACGTTTCAACATTAACGTATATACTATACagataaaacttttaaaaccaGGGTCGCCAAGGAGTTACACGAGTCCCGGGGCAAACGTTTCCAAGGCACCCCTATGATGTCACAAGATTTTAGCAATATTTCTACATGGATTATTATTCTCGGATAAACAATAACATATGGTATCTAGAAATTTAATTCTCGATAGAAACAAACATACCGAACAAGCGGAAACCATATCGTCCACCCATTTTCGCTGACTTGCGTTGTACGTTTCAACAGCTTTTCGATGTCCTTCACCTTTataacaagaaaaaataaaacctTTAAGAGAAGAATATCTAACAAGGgattcccctcccccccctgaTGTTacactctgagtgtgtccacgaCGGGCAAGCTGAAGAAATTGCGGAATCGAACATGCCACCATTGGTTTGCTATAac

Transcript

ENSNOVT00005017551

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6ZPJ3	(E3-independent) E2 ubiquitin-conjugating enzyme UBE2O OS=Mus musculus OX=10090 GN=Ube2o PE=1 SV=3
Q9C0C9	(E3-independent) E2 ubiquitin-conjugating enzyme OS=Homo sapiens OX=9606 GN=UBE2O PE=1 SV=3
Q9ZVX1	Probable ubiquitin-conjugating enzyme E2 23 OS=Arabidopsis thaliana OX=3702 GN=UBC23 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005860 (this species only)
Ubiquitin family	E2\|UBC\|UBC · all ubiquitin genes in this species
Ubiquitin family	UBD\|UBC-like\|UBC · all ubiquitin genes in this species
Ubiquitin family	E2\|UEV\|UEV · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00179 all species →	UQ_con	Ubiquitin-conjugating enzyme	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016135 all species →	Homologous_superfamily	Ubiquitin-conjugating enzyme/RWD-like	Interproscan
IPR000608 all species →	Domain	Ubiquitin-conjugating enzyme E2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46116 all species →	(E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0061631 all species →	Molecular Function	ubiquitin conjugating enzyme activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10581	UBE2O; ubiquitin-conjugating enzyme E2 O	EC:2.3.2.24	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.