Gene detail

Detailed information of ENSNOVP00005020306.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: XP_028403805.1, general transcription factor 3C polypeptide 3-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSNOVT00005022817

AAGCAAGTGGAAACTTCCCAACCTTTTTGGTGAAAAAATCGTTACCAATCAAGTCCTACCTCTAGGATTCATGTCTGTGGAAACCCAACCAAACCCAGCCAGGTAAATGCGATAAAATTCCTATAAAATAGACCTCCACTAACTTTTATTTGAATAAAATCTCACAACCCTTTAATATTTCGCTATTTAAGAGATATCTTGGTTCAATTAGGACATGAAAAACACAACATACACCATGTTATTTAGAAAAAATGCACACTCACGTGATTTTTTGGTGAATAGAGGGTAGGGTTGGGTCAAGTTTTAGCACATGCATAAACTTAAATATTAAACAGAAGGAGTTTAAATTTAATTACCTATTAAAAGGATAGTGATTGTAGTTTACAAAAGTTGCTGAAGTACTGCAGTGCATTGGTCACATAGCAACAGTtcaggcctgttttagacgtcgaacttttcatgtgccgaacctaatgcaaatgagctcaaacaaagactttaggtctatttttaggcttaacaaggacacaactaaaggtgtttcaatggcactggccagaactaatttatttaatcatttccattgcatttttaaagtaattatatacaaagaactgaagcagatgtgttctatgaaacacagtaataatctattacataattatgatattttattgtaatgaaagggtgtatatcactgaggtatatattgatacaatattgtttttattttggaaggataatcatctatatgtataccacaagatatagcacaattgatgaactaactactgaacagccacagcaaaatcatactcagtcatcccatctgctcaaaatgtagaagttcattaacttcattcttacattcaagtagttgcatcatacatagatgcactagtctagggggcctggtcagtggtaaataccatgagccggaggaaccatatggcgtcaatatggcgtcatttcaggcgaaaatccgccatgttttttgcttcactttttttccccgagcactaccACAAATATTTGTGcaaatcttacatgttttccatGGCTTCCCCCTGCAATCcacatttaacaaagattaagcTGATTCTCAAACCTTTTTGTGAACTGCTAGATACAAACatttttcttctaaaatgtgTTCCGTTTCGCAGCCGATCATCTTTTTACTTCTGTaagtttgtgcggaggtagcgttccagttttatttagttcactgACGGATTCAGATTTATGACGTTTTTTGACgtcacagaaattttaaTTTAACTAGTATGATAGATAGTAATgataaatacatttttaaataccGGTAGTCATTGTtgaaatttccaaataatgcaaattaaaaatcacaaaatcaaaattttcattccATTATTATACACTTTAACACATTAATGCTAAATTGCTAATAGTcagagaacaaaataacaaccagagaacaaaataacaatagttTGGTTTGGAATTAAAGCTTTGAATGAATCATtataacataatataataaatgttcCATAATAACTGCATGAAATCAACTGAACTAACAATAtcaaataaatcaccatgcTGTGAGAAGTGTATTTATAGTGAGTATTTGCATTTGTTATGATTCCGACCTGCTAAAAACGTAGGTCATTAACACGCATACCATGTTACTGACAAGGATTATTTCAGCGAtttcatgttaatttacataaactttagctttgattttctcagcttagacaacgttgatgttgaaaattacttcgccaataaagtGAATAAACTCACAAACATCGACCGTTATTTAAgcaatttaaagcacttgtagtcgtgctttatcagatataaaatgctcggcttgcgcctcacAAAGCTTCTAGTTCTGAATGCATGAGATGTCATGAACAGAAGTTATTTCAACAGCTACGCTTGACGCCTTTGAAATTTTCACCGTTCAAATATAAGATGTCAaagtctgatCTGAaagtaaattttgaaaataatccTTTCATCTACAGTACATATCAAATACATTCAAAAAAATGTAATTGATTGCAGACCCCTAAACTtaaaaatcgtccgtaataaTGATTCCTGCCAATTACACATTCGATCACTATTCTACCCACGGTCAGCAAAGTCTTAGAGAAGGTTGTACATCATCAAGTTTATAAATACCTTATGGATGAAAgtttgtaattttattCGTTATTAATGAGAAAAATATTCTCTAAGTAAGTAAAGTGACAGATTCAAAATATGTTACCAAAAATAAAACATCTAATCGATATGCAT

Protein

Uniprot

Uniprot term	Description
Q9Y5Q9	General transcription factor 3C polypeptide 3 OS=Homo sapiens OX=9606 GN=GTF3C3 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13432	TPR_16	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR039340	Family	Transcription factor Tfc4/TFIIIC-102/Sfc4	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23082	TRANSCRIPTION INITIATION FACTOR IIIC TFIIIC , POLYPEPTIDE 3-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000127	Cellular Component	transcription factor TFIIIC complex	Interproscan
GO:0006383	Biological Process	transcription by RNA polymerase III	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16141	ALB; serum albumin	-	Exosome	ko04147	deepkoala