Gene detail

Detailed information of ENSNOVP00005029817.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: CAB4020206.1, Kelch domain-containing 8B [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSNOVT00005033703

GAACATTGGTGTGAAAAAGATGCTCAGTTAACTAAAATTTCTCAAGAAACGAATTATTTGGTCAAGGAAATCTTGGTCAAGGAAGTACTTAAGCAACAATCTCGTGAAAGTGAAAACGTGTCACAGGCGAATAAATTGGGCAAGTGTGATTTCAGTGGGACGATTAGAAATCTCAAGAAGACATTTTTACCAGGAACTAGACAATGGCTTTTTGATGAACTCGGTAACTGGTTTAATGATGAAGATCCTGATTCCAACGTAATGATTCTGACGGCTGGTCCAGGGATTGGAAAGAGCGTTTTTGCAGCTGAAGTTTGTGGAAGCTATGCCGAACAAGGACAGCTGGCTGCTGGTCACTTCTGCAAGTATAATAATTCAGATTACAGAAATCCACACATGATAATCGAGTCCTTGGCCAGCCACATGTGCGATAATGTGACAGGTTTTAGAGCTAAACTTGATGATCAACTGCAAAGAAACCATTCCAAAGAAACACTATCAGATGCCTTTCGTGTTCTTTTAAACGATCCTCTCCATGCTCTGGAAGAGCGCGAAACCATGCTATTGGTTATAGATGCACTGGATGAAAGCGAGGTTGGAGGTAAAAGTGAATTTCTGCAGTTAATTGCAGAAGAGTTTCCTAAACTACCGCAATGGATCAAGATCTTTATCACAAGCAGACCAGAGCTACTAGCACAAGAAGAATTGCAATATCTCAAACATGTGCGTATTAGTCCTCGTGATGAGAATAACGAAGAGGATCTCCTAAAGTATATTCGAAATTTTTTGTTGCCTATCTGTGATGATGAGAACGTCCTTGAGTCATTAGCTTGGGAATGCAAAGGATCATTTCTTTACGCCTATCACATTCGGATGGAGTTAAAGAAGACAACAAAACAGCTAACGAAAGAAAACGTCTCCGAACTCGTTCCCAATGGCATATCTGGTTTTTACAAAAAGCAATTTGAGCGTCTTAAAAACCACCTCGATGAACTTTGTCAGTCAGAAATCAAGTTAAAGCGTCTGCTTGAAGTGCTTGTCGCTGCTAAAGGTCCATTGCCATTGAGTTTAGTGCCAGAGTGTCTAGGGTTAACTGATGACACCGAGTATGAAGTGCGTAACGCAATCAGTGAAATCATGTCCTTGATTTTGCCAGTTTATGACGATTGTTTAACTGTTTATCACAAGTCACTTATTGATTGGTTGACGTCTGATGGTTATAAAGAGCATGCATTTACAGTTGATTCCCAAAGTGGACACAAGCCATTATGGAAAGCCTGCGAGAAGGTGTTTAAACAAATTATTTCTTTGGATATGTTGTCTAGCTTCAATGCAACTCCGTTAAATCTATATGCTCTCGCGTATGGAATTTCTCATATGATCCAGTCTGCCGACATAGCCAGTTACCATTGGTCAGTTGATGTGAAGATAGTCCATGCCAGGACTACATTAAACTGGTTCCAGATTCACGAAATAAAACTCGAATGGATGGAAATCTTGAAGAATTCATTTTCAAGTTTAAGCAGTGAACTTTTACAGGAGTTACACTGGCATGTCAGACTTTGCGATCGTGATTCCATGCTTTATGATAATCCCGCTTTTTACTTGCAATCTGTAGCAAATATAATAAGTTGCAGTGATGGTTGCTCGGAAAAACGATCTCTTGCTAGATCAATGTTGAAACAGGGCCAACATTATTGGTACTGGAAATAACAACATCCAACTTTTACTGTCCAGCAACAGTCGTGTTATTGACATATTTCAGTTACCCGAGGTAATTCCTATTGCTCGTCTCAATAGACCTTACTTCCCATTCCTACTTCCCATTACAAGATACCACTGGCGTGACTGTATCTTACATCATAccaatgagtcaataaagttgAGTGAACTTAGCCAGTTAACGACTATGGTCACGCAACAGAGAGGTTTCCTGAAATTAGATGAAAGTATAGCCATGTACTTTATTGGATGCCCTTGTAGTTATTTGAAATCAACTAGAGCTGTTCCCGTTAAAGTTGAAGGACTATACGTGGTTCCATCTTTCGACaagttaaatatttt

Transcript

ENSNOVT00005033703

Protein

Uniprot

Gene family

Uniprot term	Description
A6QPM3	Putative histone-lysine N-methyltransferase PRDM6 OS=Bos taurus OX=9913 GN=PRDM6 PE=2 SV=1
Q9NQX0	Putative histone-lysine N-methyltransferase PRDM6 OS=Homo sapiens OX=9606 GN=PRDM6 PE=1 SV=2
Q3UZD5	Putative histone-lysine N-methyltransferase PRDM6 OS=Mus musculus OX=10090 GN=Prdm6 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|U-box

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF13418	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046341	Homologous_superfamily	SET domain superfamily	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR011043	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632	LD33804P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan