Gene detail

Detailed information of ENSNOVP00005031909.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: CAB3977822.1, TNF receptor-associated factor family DDB_G0272829-like [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSNOVT00005036143

GAGAATTTTTACTGCATTGTGTCTGGCGAGGTATAAAGGTTTTTGTGAGATGACATGCTTGCTCGCTGCAGAATGGGAATTAGGATCGAGGTTGGTTTGGCATTAATGGTTTTCCATAACAATCATATTTACTTTCGAAAAGGAAAATTCCACTTGATGTGAAAGTTGCTAGGGGACGACATGCTGAGAGGTTAAGCATGTGAGATTATCCCTCCCACCATATTAATCATGGTGGGCTGAGCACAAAGTTTCTTTGAACAAGTTACAGTCGCTGAAAGCGCGAAGACTAACCTTACTTGAAGATTTGTTCACATTATCTTTGTTTCTTTGAACGAAATACGTGAGTTTAATTAAAGTGGGTGAAGTAAAAACTTTTTTAAGTctgttttacacaattaatttttttttcttttatttgatttacaatcCTTAAAGCAGATCGAAGGAGAAGACAACAGAACATGATTCCCTATAATGAAGTCCCTCCAAAAATTACACTGAGCAGTACGCACGACACGACAatcaaataatgaaataaacCTCTACACACAACAAATCAACTAACTAATGACACATGTAGGAGGAAATCCACACGCAAGGAATAAAATATGTCGCCTGCAGTGgttttatacctgataaagctcATTCTATATttggtattctttatataaagaatataccTAATGAGTCGCCATCTATTGCAGTCGTGCTTGAAGCTATTCAAAACACTTGCAATCGTGTTATGCCATATCTAAATTGCTCCTGCTGTGCTCTTGTATTTTAAATGATAAAACTGATTCTtaagtgtgttttaaatagtttaaatattaatattcctaTCTCGAATATtcctgaaatatatattttcaaatagaACTATTGCACAGCACACATTCTTGCTAGAAATATTCAAATTCCACCATgtagaaatatttttatattcttacctaaaatacacattcGAGCTACTTTGAAAAAGACTTTGAATGGTCATCAATCTTAATTTGGATAGACTGTTCGCACATCCTATATATAACTTCAATGCCATTATTTTCCATGCCACTGCCTAAACTAATGATATAATGAGAGAGGACTTTCACATTTATGTCTAGACTAGCAGTCTATATCACAACTGTCCATCCTTAAATATTTCCATCTCTATAGACACAATTTTCATGTGCCAATCTGATAACAGCTATAGATTTCGAGATTTATATGGGGATTTATAAGGTCGAATAGACTGGAAGACAAGGATGCAATTAGATAATTTATGTACAAATTATGCCAGTAAGGAAACAGCTTGGGTATTACAATAAGTGTCTCTGTATAATATATGTGctttcatattggaaaaaagaACGTAACTGGGGTcaaagggccttcgctcgatcgaaagttttttatttatttgcagaTTTTACATCTTTTAGCAAAAACATACAAATGAAACTTATGTTTTTGTGTTGCCAATATTGTTCTCTAAGTATAACGACTAATGCATGTTTGGGCGATTTAAGGCATTTTAAGAAAAACCCAAGCAGTTCAGTTGGTATAGTGAAGGCGAGTTATTATCCTCATACAGGCCTTTATgaaatcagaaggcagcaaaagttctactcaccatgcacctaagcgatacaaacagattcgacgtttcgagcaaaggccctttgttgAGAATTAgtgtgaagggcctttgctcgaaacgtcgaatctgttggtatcgcttaggtagtgagtagaacctttgctgccttttgatgttgttatccgctacctacactggccacgtattgaagtttatgaaATCCCACTGTTTTGTATAGGaagttttaaagtatttttctGTTTATGTTATTCGATCCATGATTAAGGAAAAACCACTTCTTGTGTGGCAAAAACAGGACGGAGTTTATATAGAAAATATGTCAACAACCTCAGGGAGTGTACATAATAACAATCGTAGCACAAATTCCGAAAACAATGCAAGGAGTGCTATTTCTTGGTAACCCAAACAACTAATTTTCAGTAAAACACACAACGTAGGTGGacaattatcatttatagacctgaAGCGTGGGGGATTTGGTGAAATATCCCCCGAAGTCATTAAATATCATCACTTGGGGTAATATTTTACTGAATCctccgagcggagggtctatgtACAAGTAATAATCTTTATTTTAACAAAGTAGCAACAATGATACATAAGGTATacaattacaaatatttaacaatcaCGATCAATAGGAattataaaatgatatattataccgataAAATGATAGAAACTATGCAAAAAACGTAAAGTTTTCTTCCTGGTCGGCTATTTAAAGCACAGTGAAATGTCTCCGCCTTTTTTTATTGCGTGTAGCTATGCGTGGGTTT

Protein

Uniprot

Uniprot term	Description
B5DF45	TNF receptor-associated factor 6 OS=Rattus norvegicus OX=10116 GN=Traf6 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02176	zf-TRAF	TRAF-type zinc finger	Family	Interproscan
PF01344	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652	Repeat	Kelch repeat type 1	Interproscan
IPR001293	Domain	Zinc finger, TRAF-type	Interproscan
IPR015915	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011043	Homologous_superfamily	Galactose oxidase/kelch, beta-propeller	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10131	TNF RECEPTOR ASSOCIATED FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan