Gene detail

Detailed information of ENSNOVP00005033753.1 in Eunicella verrucosa

Genomic Location: not available for this species
NR annotation: XP_028399253.1, sorting nexin-27-like [Dendronephthya gigantea]
Species abbreviation EVERR · all data for this species · gene families

Sequence

CDS

Transcript

ENSNOVT00005038475

aggttaatatatatttagataCATTATGTTTGCGTTTGCCTCATTTTCCCGCTCATATGCATTTTGTAATAGGctttttgaatatttcaaaattcatgAAATATTGTTGTCATGCTTATAAGTCGGAGATATGTCTGTGAAATTATAGACTCGAATTGCGATAAAATACAGCTGTCTGGTCAACGGGTATAGTGCCACGTTTTCGGTTTTTGTCTCAATCCCTTACGTCGTAAACACATTCAACCGACAACCCATgttatataaTAAAACATTAGTAATTATGTGTTAAACGTTTTTCACTTCAAGCGGACATAGTATTTATCATATTTTTGAGTTAAACTAAGGTCAGAAATGATAAATTATATCTAGAAGTCAACAATGGCTTGAAATATGGTCAAGAAGTCCTTAAATGTAGTCAAAAGGAAGTTAATTTAttgtagaatactaccaacAATGGACCACCatatttgagatatctttttcaggtagttcagacacaaaccacgccagcttatttatgtCACTAAAGTCCATACGGTGAATTTCCCATTCTCCAAAAGGAGAAGCTTATCGTTTCACTGAATTTAATTTGATTTTCCAAGATTTGAGAGCACTATATCATTGTGTTTTGCTCAAAAGCAACTACTGCATGAATGCATGCAGGCACGTTACGTactgcaatgaaaaATAGCCTTTACAGATAACAACGTGTTATCTACTTTTCAGGGCAACACCTTTTGAAAGCCCATGGTGTTTGAACCTCGTTAAGACttgtttgtataaaacattcaaAAAATGTATGTACAGAGCAATCCATTCATTCTCCGATCCGAGAGTTCATCGATTTTTGCGGCCTCTTACTTGGCAGAAATTGACCCCAGAATTGAAATCAGATTGGGGTTAGGGTAACAGATCTATAACGCCTTCATATAGATAACCTCCTGCCCGCCACACTTTATACTGTCTAGGGACAGATTGTCCAAAGCtgcgttaaaatttaacccgcttttttggtttgtgtatttttgcatgtcAAATCTTCATACTGTGCTGTCtggcttgtttttattataaacgCGAATTCATTAAATTTAGAAAACTAGATTTTGGGAGTGTAGCCAGTTTTGAGACACAATTACGGTAGATTCCGCATGTTTTTATTATCAATGCTATATAAGGTCTATGCTATTGTATCGCTTTCCCGCGCcagcgaagcgaccgattttgaTGTCgtaaaaaatcagtcgcgcgggcacgccaagaaacctaaatgtagttcaacttccaagcgtgtccgcgcgcacaaaagcagacagaaaacactcagattagacacctatagcaaaagttgaatcATGTTTGCTCttcaaaacgactgcaatggaaaacgaccTTTATTCTGGAGGTGTATGGAAAACAGTTTGGAAGTGATTcaagtgatagagctatctagtatgaataaagtttaGTTTTTGTAGATGGAAATATTTAGGATTAGAGTTTGGTAGTAATGCTAAGATTAGGACTAAATCATtacattaacaaataaataaaaagtaacGAGAAATTAATTACACACATTTCACTGTATCATGCGTGCACATAAATTCAGACATAAGCTCGCGCGCCAGTCAAATTAAATATCGCAGATTCACTTCAGCTCGGCTGAACTTTGTTCCTAATCCTCTAAAAATAGTTGAAGAGTTCACAATATAAAGAGGTCTTAGTCATTGTAAAAAGAATGATAATTACACAGTAATTGTCTAGCGACCTGTTTTCGTTTATGACAATTAGATGAGTTGGCTCAACGAACGAGTAAACATTGCCCAGAGCATCATGGCAACGATTGAAAACATATAAACATAGACTATGATATGAAACTGATAATTGCCTGTTATTATAGGTAATAGGGATATACATATGGCAATGTACTTCAAAACGCATTGAGGAAAACACTAGAATAATAGACAGTATACGTCAATGATCAAACTATCAAAGCAATTGGACTCGCTTGGCTGTAGCTTCGATTGTTGCCTGAGGGTTCGAAAATCGCTTGTGTTTTTCGCAGCTGCTCCCGGTTAggtgtaaaatatggaaatagTTTTCGTTCAAAATTGCCATCTACATGCAGCATGCTGTTCTGTTGAACGAGACGCTCAAAATCTACAATATTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q96L92	Sorting nexin-27 OS=Homo sapiens OX=9606 GN=SNX27 PE=1 SV=2
Q3UHD6	Sorting nexin-27 OS=Mus musculus OX=10090 GN=Snx27 PE=1 SV=2
A5PKA5	Sorting nexin-27 OS=Bos taurus OX=9913 GN=SNX27 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005084 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00788 all species →	RA	Ras association (RalGDS/AF-6) domain	Domain	Interproscan
PF21271 all species →	SNX17-31_F2_FERM	Sortin nexin 17/31, FERM domain, F2 lobe	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000159 all species →	Domain	Ras-associating domain	Interproscan
IPR029071 all species →	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR037831 all species →	Family	SNX17/27/31-like	Interproscan
IPR037827 all species →	Domain	SNX27, atypical FERM-like domain	Interproscan
IPR048767 all species →	Domain	Sortin nexin 17/31, FERM domain, F2 lobe	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12431 all species →	SORTING NEXIN 17 AND 27	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0005769 all species →	Cellular Component	early endosome	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0035091 all species →	Molecular Function	phosphatidylinositol binding	Interproscan
GO:1990126 all species →	Biological Process	endocytic recycling	Interproscan
GO:0032266 all species →	Molecular Function	phosphatidylinositol-3-phosphate binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNOVP00005033753.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.