Gene detail

Detailed information of ENSNOVP00005036467.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: XP_028400378.1, protein spinster homolog 3-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSNOVT00005041423

TAATAAGAATTGGACTttgaatgtttgtttttttcgaaGAGGTGTACATGTATCTCGTAAATGTTTCAATAGGATATAAGATTTCTTTTTTCTAAATGACCTCAAGATTTTTACTGCAGACGTCTTCATGTTCTGAAATAGCGAGCTCAAGATATgcgataaaataaaaacaatttgaatGCGATTGTCTCCACTTCTAGCAATTATAAAAAGGAAGAAAcatgttttactaatttcaTCAGGATCTTTATCCTTCTTATTGTTTAGCTAAGATAATTTGAAAtagaaatttgaatttgaatagcTTGATGGAGATGTTTATTCAAGAGTTCAGTTGAGTGTGTAAAACATGCATGCTTTCTTTAATAGACTCAAGCTGCtgtatagaaaatattttataaagaaGTAAATTACATGTAGtgtcttagaacgagtggatattatacacagtcgaagctacggaggtagcttagtggtcagagcagtgcaccggcatcgcacaggcgtaggttcgattcctgccggaggaccttatagttgatgaatttttctcaactgttcccggtaagaatttcgactgtgtataatatccactcgttctaagacacattaaccctatagaaTCTTAAATGTAGAAATACTAGTAGATAGTTTTATGTAGACTTCTCGCGCGGAAACCTGAACCATACCTTaatcaacaccgcggtcaaacgtaacgcgcatgtgcgagatctcagaaaagcgcgggaaaaataaaggcaaattgtatacaaagcgcagacgtttgaccgcggtgttacctTAATCTAGCAATTACCTTAGTTTCAGTCCCCTTACGTGCGGTCATTTTAGCCTTTGTGGCCTCCCTACGACAAAACATCAGCCTCAACTGAGGGGTTTCTGGGGGCATGCCCCAAGGAAAATTTTTGTGTTTTCGAAGGAGTTAGTGCTCTCCTATTGAAGTTAGTGCTCTCCTATTGAAGTTAGTGCTCTCCTTTCGTTTTTGCTGTACCAGTGTAGTTAAcgttttatattatttcagTGAAGAATTTTGTACTTACATCATGTATATGTTGCTACGCAGCATGCACACAAATCACACAGTTTGTAGTGACGTGGGTGGGTGGGTAAGGTATTTGAATCTCGCTacaggaattaaaaattttttatagcTATGGCTACGCTTATATATAAGTATTTCTAATCTGCACAAAATCAAAAATAGGAGTGAGATTAATTGGTTTTTTAATTTGTGTAGAAATCTAACTCTAAATCTTCATTTTGACATTGATGAATTATCTAAAAGTAGCTACAAACtgaattatataatattcttTGGTGAactgatattttgatCAGGTTATCAATAATGCATCAACATTCGTTTTTTAATTAAACTTGCAGACATTATCTAGCTGTATgttaattttacaataattacTCATAATTTTACCAGCAGCTATTCAATAAAGCGTCTCGAATATATTATATCCCGCTGTCTTTTTTGTGAAGGCGAAAGGTGCATGAGACTGTCGTGCATTCAATAACAAAAATCAACCGTTTTCAATGAGACGACGGACAATTGGAAGGGATGATTCTGGGATTGATCATTTATTAAGACTTTATGATAAAATTCAGGTACaagtatataaataaaatgCTGTTACATGTTGAAGtttatttactttttatttAATGATGTTCGACTATGGGAATGATTGAATGTTTCGGAAGGGATATGTCCAGAACGACGATATCAGTAATATTCGTGATGAGTATAATTATAGATAACTGAAAAGATAAACAATATAGAATGGCTAGTGTAGATCACCTAAACTAAAGTGTGTCCTTATGCGCAACCATCCGTTTATTCTTCCTTACTGAATGGACAATATTATTATAACCGACCCTCGTCACTCTTTGACCAGTACTGGGAGTAACTCATATCTGTACATACATGGCACTAGTTTCAAAATAGCGACCAACCATGCATCATTGTCAGTTAGTGACACAATTTTTTctgggcgctttctcgatattgtctcgatatatgagcaaacGTAATATGAATATAATAGAATAACCTGGACCCAAACCCCACCCTAAGTTACCCTAACCTATTTTGGTTGCTcctatatcgagaaagtgccttTTTCTGTATTTAATTTCTCTCATTAGTAAAAATAGACATATTGTCAATTTAAGTCTTACAACTTGCTGGACTGTTTCCAACTTCATGCTACGTGATTAAACGTGATTGCGAACTAAACATAACGTCATTATAACGTCTTTGAAATCGACTAAAAGGGTAGGGCAAACGTTGGTTAACTTAGTATTACATGGGGTATAGTTTGATACTGAAGATTCTTTAGTTTAGTTGACACGAAAAGATTTATTTCGGCTCAATTTTATCGTTGTTTGAATGTCATTGTCAGTTCAAGTGCATGAGCTTAGCGCTCCAGGTGTCCAAtgcatttatatttgtttttcaTC

Protein

Uniprot

Uniprot term	Description
Q5XGK0	Protein spinster homolog 1 OS=Xenopus laevis OX=8355 GN=spns1 PE=2 SV=1
A8WGF7	Protein spinster homolog 1 OS=Xenopus tropicalis OX=8364 GN=spns1 PE=2 SV=2
Q7ZU13	Protein spinster homolog 1 OS=Danio rerio OX=7955 GN=spns1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR044770	Family	Protein spinster-like	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23505	SPINSTER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0005215	Molecular Function	transporter activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23677	SPNS; MFS transporter, Spinster family, sphingosine-1-phosphate transporter	-	Transporters	ko02000	deepkoala