Gene detail

Detailed information of ENSNOVP00005037627.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: CAB4000899.1, receptor-type tyrosine- phosphatase delta isoform X23, partial [Paramuricea clavata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSNOVT00005042713

tttaaaaatatatttgcctaatttgattgtatgtgtttgtcttttattcctgggcgactttacactatatgcccgcgactgtcatcacaggtgtataatataaatacaaaggctgctgactcccggtccgaaaccggcgatacgaacacttcaactcgaaaaatatcccctttaaattactttgttctcggtaccccctgacaatccgaacggtaaaggaggccagGTCGCTGAGCAGGCGCGGTAGTgaagatcgggctttcaaagttctacgcacgcctgggctgcctgtgctattattagcgcttgcgaaacatgtacatttcagacacgcaacacaactatttaacgattttggcgtttttctttatttatttgcaagaaaaagcattgctttagcaaaatatttgacacttttatacaatactaacataaagtttaagtaaaaagtgttaaattaaaggtcaaaacccgaaattcatttctgacttcatcccagTATAAAGCGGGTgacgtgttcatatgggaagattttcatcccgcctacccatgatctcggcaaattcaagcgcgAAAATCCCAGTTGGGGATTGCTAAATTTCTTCCTGTTTCTCTGAtagaaatttttgtttatttccgAATGTTCTTCGTTAAGACTTCGGGAAAAGTTTTCAATTTTAGGGGCAACCGGACAACGGAACACGTACTGACGTACATGGGAAGAAATGTTGTTATCAATGAAGGTCGCGCGTAGCAaaattaaatatacaactatcaacTCCCCGACCTCTTGAAACTGCCAGTAATTTTCTTGTATACTTTTCGGATAGTTGTAATATCTATAGGCTGCAGCTGATTGCTGAAAAAGGTAGTTGTCTGCTTATAATTTTGCCTTATGCAGTCGCGTTGGAGGAAAGTGCTTACAGCTTGACTCTGTCAAACCAGTCGCAATTTTTCTCTGGGTACTTCAGTTTAGCTAACCAGTTTAATTATAAAATCAATTTAGTTTTGTTTGGTTTACtttaggtttcctctgtATGTCTGGATCAAGAAGGGTACCTTTACtcgacctctagggagaacagtttagaacagatagagctGCTATCcagaataaagttagtttaccGCGGAAACAATGCTTTCGTACTTTGCTGAACTTTGGAAAATATGGCTAGCAAAAAATGTTTTTAGGCGAAGTAGTCGGGCGTCAaaagtcgggcaatcgtcctgtttacctgaaatcaatttggtctttccaacgacttggtcttgtttcataattttccgggggacgcctatgGAGAGCTAAGcggaattgcgaaggacgcagctcaacatGATCGAgttgaaggctttctaagggtgCCTCTGCTTTGCGGGGGAGTACATCAGTTAGAAAATACAATGTTGTGGAATACTTTTTTTCGTCTGGGATTGAATTAAGTTCAGCCTTCGATTTAGTCCAATTTGTGCCCATTTCTATGCAGGCTTACGGTAGTAGAGCCAAAGGATTCGAGAGCTGCCGTTAGGTTTATATtgtgaaaaataagaaaaattttcaaatgacaAAACACCGCTTTTCAACATcgaaaaaacattttaaaacattctacTTGTTGATTTAAGGCTGTTAGTCCttgcttttgaaaaaaataGATGTTTTCACAGTTGTGGTATTTTTGTAATTTCGCCCCTtaattcaaaaaaggttgtccttcaataaccttaaaccttaaactctaagcggtaagggatgatggatgttgcttatttagagcctcggagcggacaaattccctagtaaactagcaattctatacattgtcagtgtgtatcttatgtACAATCGTTCCTGAAACTGAAAAGTGTAAAAACATGTCTCTAAATTTTCCACTCACCGAATGTTTGATTAATTTCCTAGATACTTCAAGACTCTGGCCAGGATTCTACTGTGACAAATGTCTTTGTTATACTACTGTATTCCCACGGGAAAAAATCGTCTGCAGAAACGCTTTTCAATAGAAGATTCGTCAGGATAAGCTcacaacagtttagaactaggGATGAAGCAATTCAGTACATGTATAGTAAGTTTAGCCATGATCCCTTCCTGTAgtataacactggatcaaaaagaAATGACGCTTACAGCTTTGATTAGCTACGCCAAGCAGCGTCGAAGCACCTAGAAGTCGCACAACACATTTCAAATCACTTACGATTTCCTTTAGTTTGGACATCTTGTACAGTATATTCGTGTGTACTGTGGTTCGTCTCATTCATATGGCATGTAGCATGAATATAATCTGACAGGCTTGATGTCATTGGCGTGTTATTTTGTTCTTTATTTAATGCGTTTACAAGTTCATAGATACTTTTAGGTAAACTTTTGTATCTCGATAGGTGCATGCGCATGAAAATGGCGGGAGAAGGTCTGGGCACGAAAGTTTGACGGCAGTGTTAACAACTTTATTTAACGGGGGCCAATTGTTCAAAACAAATTCAATGCAAATTTCCAAGCATGCAggttgtttataaacttgggaaattTACTTTGCAAACACAGTTCCACAGTTTCACTATTCTGTTAAAGTATGAAGCCTGGTAGGTGGTAGTTTTGCAGAAGGGAGTCTTTAG

Transcript

ENSNOVT00005042713

Protein

Uniprot

Uniprot term	Description
P18433	Receptor-type tyrosine-protein phosphatase alpha OS=Homo sapiens OX=9606 GN=PTPRA PE=1 SV=3
Q03348	Receptor-type tyrosine-protein phosphatase alpha OS=Rattus norvegicus OX=10116 GN=Ptpra PE=1 SV=1
P49446	Receptor-type tyrosine-protein phosphatase epsilon OS=Mus musculus OX=10090 GN=Ptpre PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00102	Y_phosphatase	Protein-tyrosine phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000387	Domain	Tyrosine-specific protein phosphatases domain	Interproscan
IPR003595	Domain	Protein-tyrosine phosphatase, catalytic	Interproscan
IPR000242	Domain	Tyrosine-specific protein phosphatase, PTPase domain	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan
IPR050348	Family	Protein-Tyrosine Phosphatase	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19134	RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016311	Biological Process	dephosphorylation	Interproscan
GO:0004725	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan