Gene detail

Detailed information of ENSNOVP00005040806.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: XP_028410198.1, ubiquitin carboxyl-terminal hydrolase 47-like [Dendronephthya gigantea]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSNOVT00005046285

TGAGAGTTTACATGCAGGCGTGATTCAAAACAGTTCAGATCAAATGGCAATTACTATCAAAATATAACGAATTTTCATTTGTGTAGCAACCCACACCATGCAAAACctaaaataaacattattTTCTTTCTTCATCCAAGGATAAAAAGACTAAAGAAACGAAAGCAGAGAAGACAAAAGTGGAGAAGTCAAAATCCAACGAGAAATCAAAAATTTAGAAATGTGACTCAGCCAGACCATCCGATAACTAAAAGCTTTGAATTAATCTCCTTATCCATAATCTTAATGTAAAGGTTttttttggcTCCAAAAATCCGGCAACCTTGACATGCAGTGAAAatcaagatgaagtttttcctACAAAGATATACTACAGTattttcgtAGCGGCttgacatgggcccggtctcatgttAACAGGgacttaaaaattgttattgACGGATTTGGCAAATATACAATGCGTACGTGACAATGAAGGACCAGATTTTTGacatggaaaatattgatattttataatgCCGCCGCAGCATTCTACCTTGCAGGTACCCTAGCTAGTATAGAGAGTAATACACGGATGTGCGGAAATTTGTTTACCagtttattctgtttGAAACGTTTGTCagaatagaaaaaaaaaatacttcAGACCTCAGGTTTTGTGGTAGTGATTCAGACTTCCAACTGTTGGGCGAAATCTTCCATTATTTGAAGTTTTGCTTTGGACAAAAGCATACTGAGAGACTaatttgtcgcgcgatagtcggtcatctcgcgtgacgtatcagtattatCAAAACAGTCGTTTTCCAATTGCTGTTCATTTCGTTCGTTTTCTTTTTCGACTATTGTGCTAAGCACGGAAATGTTGTCTGCGTAAAGAAAATGGTCGATTATTAAAGAGTAAAGGTAGAGGGAGTGCTAAAGGGAAACAAATTTTAAGCGGGGGATAAAACACTTCTCGAATTCCTACCAGAACTCCTTCGCAAGGTCCCTCGAATCATGccgcttccccccccccccccccccctagtatATCCATCTCTGTTGAAAATGAAATGATGATCGAAATAATTTCAATTAACTCACTTTTCCACCAATTCCTTTCCAAACCTCATGAGTGACCTGATGGCAGTTGGGGCGGTGTAGAATTTCGATACTTTGTATTTCTCACATATTGCCCACATTCTGCTTGCGTCTGGATACGTCGGAGTTCCTTCAAACTAAACCAGAGAATACATTCACTAGTAATTCTAACAAGGAGGCTATACAGACTTTCTTCAGAACTATGAGGGGGATAAGCCTGATATATGAAGCCGTACGAAATCTATAGAAAATCTATTTGAAATAACACATCTTTACACATGATCAAATACACAAGGTGACCTAAAAGGTTGTGAATGTTGCCATTACGAAATATTGGTCTAAGCGCCATTGGTCTTGGCCTGAGTGCATGTTTTCCGTATTGGTCTGCGAGCGCATCGTCCAATGAATCCCCAAACCACACAGGCACCTGTGGtggacctcgtagctcagttggtagagcattggaatGACAATTCGaaaccgcggtcaagcaatttttcagttttgccggtgtggacacactcgtAAGGTAGGAGTAACATGggcaaaaaaatcaaacacgaGTTCACGACCACCACAAGCAAAAGATACTTTAAATAGTGCTGAGATACACTAACCATGACACTAGTAGCACCATTCGCCATTGGTCCATACGTGATGTAACTGTGGCCAGTGATCCAACCAATATCTGCAGTACACCAATACACCTCACCCGGGTGGTAATCAAAGTCATACCTTAAACATAGCAACGCAAAATTATGAGAACCAGGGGTGAACTGACAGCCTTTTGTGCCTCAGCCAGGAATAAAATCAAGGCCCATGAATGTGAtacaataattaaataatacaagTTTCTAACTTACTTAAATGTTGTTGCAGTGTACAACATATATCCACCAGTTGTGTGAAGAACACCTTTTGGCTTACCTGTTGAACCACTACAAAAACAAATCGGGACTGAATCATCTCACATAATGAAACTG

Protein

Uniprot

Uniprot term	Description
E1C1R4	Ubiquitin carboxyl-terminal hydrolase 47 OS=Gallus gallus OX=9031 GN=USP47 PE=3 SV=1
Q96K76	Ubiquitin carboxyl-terminal hydrolase 47 OS=Homo sapiens OX=9606 GN=USP47 PE=1 SV=3
Q8BY87	Ubiquitin carboxyl-terminal hydrolase 47 OS=Mus musculus OX=10090 GN=Usp47 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14560	Ubiquitin_2	Ubiquitin-like domain	Domain	Interproscan
PF19718	USP47_C	Ubiquitin carboxyl-terminal hydrolase 47 C-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR045578	Domain	Ubiquitin carboxyl-terminal hydrolase 47, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
-	-	-

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan