Gene detail

Detailed information of ENSNOVP00005042381.1 in Eunicella verrucosa

Genomic Location: not available for this species
NR annotation: PFX18481.1, Retrovirus-related Pol polyprotein [Stylophora pistillata]
Species abbreviation EVERR · all data for this species · gene families

Sequence

CDS

ENSNOVT00005048005

AGTCTGTTCATTTTTATAGCTAGCGCTATACATTATTtgcgttttccgcctggcaaatctaGTCATTTATCTGAGCGAAAATAAGCAGCGGCTGTCAGACAGTCGCACCGGGCGTAAAATAGACTGCTTTAGCAAACACAAATGTTATCAAGTCAAATGTAAATGTCATGACACGCGGCTTGGCATAGTTAAGAGCTGATTGATGGATTTCCCTTTTATGATTTCCCTTTtatcgacgtttcgagcaaaggcccttcgtcgggaattagtgtgattcccgacgaagggcctttgctcgaaacgtcgaatctgtttgcatcgcttaggtagtgagtagaacttttgctgctcaCTAAGCTATAGTATATGACtgctggagggagtgctcgcggaaaaaagtgaagccaaaaacatggcggattttggcctttGCACGATCTGAAAGTCGGCCTTTGCTGAACttgctgacgccatttccagGAAACTGGTCCGACAATTTCGAAggaattaccactgaccaggctcattttGAAGCGCAGTTCACTtttcaccctcccccccccctagcttttttttttgaaaatatatattttttgcagaAAACTTATTGGAACAATGCTcagttatttttgttgttttcgagatattttttgaccaatttgtaTATCTGACATATTTTTTCAATGGAGGACAAGTTCTAAATGTTATTATCGTCAGTGAATGACAAACATTCATTCCAAGTCCTCAATGCAGCCAGTAAATAAACTGGGGGCTGGGGGTGCAGATAAacatgaaggggggggggggggagggggcatatGTTCTGGCACCAACAGTGTTTTTATTTCATCACAAAATGATATTGTcttttagattttacttaagacTGACTTCTTTCATCCCATGCAGGTTTCAGGACCAACATTTAGAATATTTCCCAGGGCCCCACTTAATGTGTACCCCTGCCAGTACTACGATTACCTTATGTTATTGACAGTGGTACATCCGTACATGATTAGACAAAAAGGTATAGATACTGAGATGAGAATTTCCCTTATCAACTGCCATATAAACAATagtaatttcaaaaatattcaaCCTTCCTCCaagtaaaattttaagttttcaagCCTTCTTATTGCTAGTTCCGACAAGAGTTTCAGACTGCACCTAAATGTGAAATGTctaacatatttacaatagtcATAATTATGATTGTTGGGGAAGCAGGATACTAACTAGTTGGGTAATTGCTTGATTCCAATGGGAATTCACCATACTCATGCCTTTTGCCCAGCAGAGAATTTCCAGCCTGTTGCAGAATCTGGTACCTCTAATCTCACTACACATGCAACTGGTTTGTAGGCTGTACAGGGGCAATTTGCTTGTTTAAAACAAATGTCATGGGTTGCCGGTCATGTGTTCAGTTCATCAGCcacaattttaattaatatagaaGGTCACATTATATATAGGTCAAAATGGGTACTAGACAGTGACCTTACTAGAACAGTGACGTATTTATAAAGGGCTGTGGGGCCATAAAGAAGAGGAATCAAATTATCCTTGTGAAGGAACGCAAGGCGCAGTAGTTCATATTAATATTCTGAATTTAGCTGTTAACATCTATCATTATAAGTGCTCATAAGTGCTTTCATGCACTTCGCTGCTCACCCAGCACTTCCTAAAAATCATTACTGGATCCACCATGATTGGTGACCTGTAAATGGAGGATCATAACCTGGCTGTGACCATTGATATTTCTCAGTATACATATTAATGGCTGTGACCCATGACCACTAATCTGCTGAGTGTCATCTGGCTGATCTGGGTACATGTACTGCACATGCAGTAATCTTAGAAATGCATTCATGCGGAGGTTGTATTCTAGAAATAATCCGATAATAGaatgtataaattatatataaatatacacacCTTTACAAAGTTGTCTATAACATGTCGTGAAATATGATTAGTATAAAAATAATGGCATTTACAGTTTATATGTAAAGTTGTAAAGTATATTAGTGTCATTTTATTAAGAGTCATTGTCTGAAAAAACCGGGCAGAACCAAAAGATCGAGGTCGGCCGATTTCCTTCATATTTATACCAATTGTTAGGAACCTTGTAAGATTACCAATGGTGTAATATGGGGTTTCACAGAGTTTTCGTTTTCGAGTTGACCACCCCACTAACTTTTGGGTTTCTGATGTCGT

Transcript

ENSNOVT00005048005

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P04323	Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825	Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q8I7P9	Retrovirus-related Pol polyprotein from transposon opus OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000010 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050951 all species →	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR021109 all species →	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR043128 all species →	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001969 all species →	Active_site	Aspartic peptidase, active site	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37984 all species →	PROTEIN CBG26694	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004190 all species →	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNOVP00005042381.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.