Detailed information of ENSNOVP00005044503.1 in Eunicella verrucosa

Genomic Location: :...
NR annotation: XP_028408998.1, LOW QUALITY PROTEIN: collagen alpha-1(XVIII) chain-like [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P39059Collagen alpha-1(XV) chain OS=Homo sapiens OX=9606 GN=COL15A1 PE=1 SV=2
O35206Collagen alpha-1(XV) chain OS=Mus musculus OX=10090 GN=Col15a1 PE=1 SV=2
P39061Collagen alpha-1(XVIII) chain OS=Mus musculus OX=10090 GN=Col18a1 PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF20010Collagen_trimerCollagen trimerization domainDomainInterproscan
PF06482EndostatinCollagenase NC10 and EndostatinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050938FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR016186Homologous_superfamilyC-type lectin-like/link domain superfamilyInterproscan
IPR045463DomainCollagen type XV/XVIII, trimerization domainInterproscan
IPR016187Homologous_superfamilyC-type lectin foldInterproscan
IPR048287DomainThrombospondin-like, N-terminal domainInterproscan
IPR010515DomainCollagenase NC10/endostatinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456SI:CH211-266K2.1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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