Gene detail

Detailed information of ENSNQRP00000002146.1 in Porites lobata

Genomic Location: Porites_lobata_contig_6:5537427...5558009
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSNQRT00000003078

ATGAAGCAGGCAGTCGAATTTGAGGAGTGTCTTAAGGATTCTCCCCGTTTTAGgTTACAGGTTGATCAAAATGAACATGACATAAATGTTTTAGAGGGAGCTTTGGAAAAGcttatAAAACTTTGCAATGGAATGGTTGAGACAGGAAAACTGTTTAATACATCCACCAGtggATTGGTTGGTGGTATTGACAGTCTAACAAAATACTTTGAAGGAGATGATCTTGTCTCCTCTACTCTTCAAAAGTTCTCGTGGGCATTATCAGAGCTCCGAACATACCTGACAGTAAAAGTAAAGAAGGTGAAAGAGACCAAAAAACTGTTTGACAGAATCAGTGATGACCGCGATAAtgctttGAGCAAAAATGCCCAACTTCAGCGCAATTGTAGGCCATCAGAGGCTGAAGAGGCAAAGAATATCGTGACTGCAATGCATTCCTGTTTCAATCATACAGCTTTGGATTATGCCTTTCAGattttaaaTTTCATGCATGCTCAGTCAACTTATTTTCATCAGGGATACGATCTGATGAATGATTTAGATGTGTACATGAAAAAAGTGTCCAAACAGTTGGAAGAAATGTCAACCCAGTTTACTGTTGACAAGAAAGAAATGGAAGAAAGACACACTCTTGTCCAAAAAATGGAGGAGAGTGGATCTTTAGGAAGAAGGACCCTTGATGACCCAAGTGGTTTGGTAATGGAAGGCTACTTGTTTAAACGCAGTAGTAATGCATTCAGGAGCTGGCATAGGAGGTACTTTACTGTGCAAAATAACCAGCTGATGTACCAGAAACGATTAAAGGATGACCAGACTGTGCTAGCAGAAGATCTTAGACTTTGTAAAGTGAGACCTACTGATGAAGCAATAGAAAGAAGATTTCTCTTTGAAGTTATTTCACCAACAAAGACATGGATCCTCCAAGCAGACAGTGACTCTTTAAGGGCTGAGTGGATGGAAGCTATttgttcgaaggctgattaCTTCTCTTTGTCTTACCCTGCAGATCCAACCTGGGCAAGTACCAACTGGGGAGTTGTGCTGTGTATAGAGTGTTCAGGGATTCATAGGAGCCTGGGTGTCCATGTGTCAAAGGTGCGGTCCCTAACGCTTGATGCATGGGAACCAGAGCAGATTAAGCTAATGACTGAGCTGGGGAATGAGTTGGTCAATGGAATCCTTGAAGCAAAAGTTGATGCTATGAGTACAAAGAAACCTACTCCACAAAGCAGCAGAGGTGAACGTGAAGCTTGGatcaaaggaaaatattcaCAACATAAGTTTGTATCGCTGGAAATCTTTCTTACAAAGTGCCAAAAATTAGACAAAGGAATGATAAAAAACCTTGCCAGAATGAAAGTTTACCATGAGGAGAAGGGCATTGAAAGAACTGACTCAAAGAAGAGTAAGATTCTCCGAAGAAAGCTTGCTCTTAAAGGACATAAGTCCAAGGCGGACAAGAGAAAGAGTGCTCCTCCAAGCCTGTTATTATCTGATCTTACAACTAAAGACTATGAGAACTTGGAGAAAATGGCTTCTAGTTTACTTGAACAAAGCAATGATGAAGTTAGTAACTGTAGTAGTGACTCGCATGATGACGAAAGACTAGAAGTTGTCTCTCCTGACGACGCTAGCAGACCAAGAGCGTCCTCTGTCAGTGGTACAAGGTCTATGTCCTTTGAAGATGGTAGGGACAGAGGAGATTCTGTTGACTCAAATTTGAGTGATGATGGATTGCTTGCTAGTGATAATAATGAGCTTGAGGTGGCTGATGAGGAGAAAAGTTTGAAGGAAGACAAGGTGAAAGCTATAGCAGTGCTTAAAAGGATCCACCCTAGTAGGCTACTGTTTAAAGCTGCAGAGTGGAAAAGTCTGCCTCTGATGGCAGCATCCCTGGCTGAAGGTGCAAAGGTTAACTGGGTAAATGAAGACGATGAATGTAAAACAGCCCTACACCAGTCGATCCTTGGGGGATCATTATCAGCTTGCGAGTTTCTGTTACAAAATGGAGCCAAGATTAATCAGAAGGACAAACGTGGAAGAGGTGCTCTGCATCATGCTGCTTTATTGGGGCAAACAGGtccCACACTTCTGTTTTTGAAGCGAGGAGGTAATCAACATGATGTTGATGAGAATGGAGAGGATCCTCTAACTATTGCTGTGAAGCAGATGCATGCAGATATAGTCACTCTAGATTTTTCAAACATGGCCTCCAAGGAACCCGACAGGCTGAAAAGGAAGTTTGACTCAAAAGATCCAAATAGGCAGACACCAGTGTGA

Transcript

ENSNQRT00000003078

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003556 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16746 all species →	BAR_3	BAR domain of APPL family	Domain	Interproscan
PF12796 all species →	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF01412 all species →	ArfGap	Putative GTPase activating protein for Arf	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037278 all species →	Homologous_superfamily	ARFGAP/RecO-like zinc finger	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR038508 all species →	Homologous_superfamily	ArfGAP domain superfamily	Interproscan
IPR004148 all species →	Domain	BAR domain	Interproscan
IPR036770 all species →	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110 all species →	Repeat	Ankyrin repeat	Interproscan
IPR045258 all species →	Family	ArfGAP ACAP1/2/3-like	Interproscan
IPR001164 all species →	Domain	Arf GTPase activating protein	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR027267 all species →	Homologous_superfamily	AH/BAR domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23180 all species →	CENTAURIN/ARF	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K12489	ACAP; Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.