Gene detail

Detailed information of ENSNQRP00000003333.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species abbreviation PLOBA · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000004487

AACACGCACACAAATGGAAACCAAACATATGGACCTGCTCTGACTGCCACTTCACTACATTCGCGTCATGCCGTTACCGTTGACATGATTTGTGACAAGATGAAACAACAGTTAAATTCTTTACAGGAGGTACATCGTGGACATCAGATGGAACAAGAAAAAGTCACACAGCAGCTGGAAACTGCGCAAGGAAGCATTAAGAAACTTGAACGCCAAGGACGAAATGCTGAGCAGAGATTCAGTTTCTTCCAAGAGATGAGGGGGTATGTCAGGGACTTGATAGAGTGCCTTAATAACAAGGTTCCAGAAATTGACGAGCTTGAGAGGTCAATGCATGCATTGTTAAAGAATCGAGCCAGTAGTCTGGTGCAGAGAAGACAACTGGACGTCAATGATCAGGCAGAAGATTTCTTAAATGCTCAAGCTGGAAGACAAAGTCAAAGTTCATCTAAACCCTCTGATCAGAATAAGATGAGACGTGCTGCTGAGAGAGAAGGAAGAAGAGCGCGTAGGAGGAAACAtagagaaaaagagaagaaaacatCCCAGCCTGATACTCATCATGAAGGACAGTCTACTGATGATGAAGAAACTGAAACAGATGCTATCAAATTCAGGGCAGAAACAAAGAGAATTACGTCAGAAGAGAAGGCCATATTTGAAGATGTCATTGAGGACTTCAGTTCAATCGACTCTATAAAGTCAAGATTTGAAGAATGGAAGAACAAACATGAAGACTGTTATACGAATGCATATATTTCACTTTGTCTTCCTAAACTGTTTGCTCCATTTATTAGACTTCAACTTTTGGACTGGAATCCATTCGAGgCCAAGAGCATGGAAATTGAAGAATTCCGCTGGTATAAAAGTCTTGTATTGTTTGGCTGTGGAGATGATCCATATGATATTGATGTTGAAGATCCTGATGTCAAACTGATTCCAGCTGTGTTAGAGAAGACGCTTATCCCAAAACTAGTTGGTCTTTTTGAACACGTGTGGGATCCATTATCCCAGAAACAGACGACACTAGCCATTAAATTAATAAGAGGAATGGCTGAGGTGTATCCCAATTTCCAGGCTCAAAACAAGACAACACAGTCGCTGTTTGCCGCAATAACTACTCGTATGCGGCGATGTGTTAGCGATGATGTATATGTTCCTCTGTATCCAAAAAgTTTACTGGATAATAAGGCTTCTGGTGCTCTACCCTTCTTTCAGAGACAATTCTGGAGTTGCGTGAAGTTGTTAGGTAACATTCTCAAGTGGGAGGGACTTATTTCATCCGCTAGACTACAAGAAATGGCGGTAGATGGACTGCTGAACAGATACCTGTTGTTAGCTCTTCAACACTCACATCTTTACTACGACAGCCTTGAGAAGGCAAAGGCGATTACAGCCTCGTTTCCAAAACAATGGTTTAACGACCAACAACAGACAACATTACCTTCTTTAGAGGCCTTTGCGCGCTATCTCGCTACGTTAGCAGCCAGTATGCAGCGCTCAAGTTCTGGATGTCCAGAAGCCGAAAGAAAGAAAGCCAGGAGTGGCATCAAGAAAGTTATTCAACTTCTACTTCAGCTAAGATCTATGGACAAAGCTAGGCTAGTAGCGGTAGAACATAACATGGACGAACTTGTGAAAGACCTTTGATATCTCCTGAGGTCATTCATGCTTGAAACTGCGCTGTGCCATGAAGCCGTCAGCAGCTGTGTATGGGCCGATGATCGTTTTAAGCATTCTTTTTCCAAGGACTTTTTTCATCATAATtgcatgtttttcattttgacaCGTATGACCAAAAATACATGCAATGTTGGACAATGTTAGTGGCTGCTATCATGAACTAAAGGTTGCcgagaaaatttcaaaaagggATGTAAAAATCACAAATGTCttcggaaaaaaaatcataatgTACTTGCGGAAGACTATTTTCCTCAATTTCTAAAAAGGAGTGACTCTGTTGATTACTTCTATGGCGGAATTTACCAAAAACTCCCCTTTtgtagaaaataataataaaaataataaacaagcTAACATTACCAAAATTTCTAATAATTACGTCTTGCACTTGACAGTTCACATTTTTATGAAATACTtcctttgaaactgaaaaagtgaaaatgTCGATGCTCACGATGTCCAAGGTAACAGAAACACTTACTCGAGTTTGACTTTACTTGATGGTGAAGTGGTTAAGTTGCCAACAGATAGCATTCTTCACGAGGGAGGTTGTTGAAAAGTTTTTGCTCTGGTGCATGATCGACTCGGATGATAGTTAGAAGTGCTCAAACACTTTTGTAAATAAACTCTTTATTGACTAAAAGAATATTTATTCCAGATCATTACTTGTGCTCTTGTTTTATAATTCCTCCGGTTAAAAAGTGCTGTCAATTGTACATTAAATAGTTAGACTACTTGTAACATTTAAAGGGTTCTTTAAGAATTTATTTAAGATCTTTTTTGGCTTTCGGTATCGTGCGGAAAAACGCTTTCTATTTTCGAGTGCCCCAGAATACCCTCTGTTCCCCCCCCCCG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07842 all species →	GCFC	GC-rich sequence DNA-binding factor-like protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012890 all species →	Family	Intron Large complex component GCFC2-like	Interproscan
IPR022783 all species →	Domain	GCF, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12214 all species →	GC-RICH SEQUENCE DNA-BINDING FACTOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000398 all species →	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSNQRP00000003333.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.