Gene detail

Detailed information of ENSNQRP00000004777.1 in Porites lobata

Genomic Location: not available for this species
NR annotation: no NCBI-NR hit recorded
Species Porites lobata · all data for this species · gene families

Sequence

CDS

Transcript

ENSNQRT00000006053

GTGTTTGATAACCCAGTCCATGAAATTTCCGACCTCGCTGGGATCAGTACTTGATAagagggaaagaaaagaagttttGGCCACGTCCAGTGAAAACGTGTCAGTTGCTTCCATTATAAGGTGGAAACGGTGACCCTGCTGATAGTACGGTGAAAATAGATTATTTCAAACCTCTGGCACAAAAACACCTATGAAAAGAGAAAGACATCGTGAGTACAAcgtcgccgccatcttggaaaccaCTCGGTTACCAAGCCATTTCATCGCATGGCTACTAAGCTAGTTAGAAagaatccaagatggcggtaGCAGACGTGGTTATCAAGCAAGAAGCTGTAGATGTAGTTGATTTGGAGGAGAGAGTCGTGCAGCTCTGTAAAGAGAACCCTAAAGGAATAACAGACCAGATAATATCACAAGATATGCCGAATATTCCGCCTCAACAAAGAGTAACAGCCATTAACAGACTTCTTTCCATGGGAAGGATTGAACTTCTAAAAAGTGGCACACAGTTATTGTACAGATATAAAGATGCTCAAGCAGCAACaaaaacaaaaggatttGATGTGCAAGAAAAATTAGTATATCAAATCATAGAAGAAGCAGGAAACAAAGGTATCTGGATTAGAGATATCAGATTCAAAAGCAACATACAGTTGACACAAGTCAACAAGATTCTAAAAAATTTAGAAAGCAAGAAACTCATCAAAGCTGTTAAATCTGTGGCTGCATCTAGAAAGAAAGTATACATGCTGTTTAATTTGGAGCCTGATATATCAGTGACTGGAGGAGCCTGGTACAGTGATCAAGACTTTGAATCCGAATTTGTAGAAGTACTAAATCAGCAGTGTTACAAGTATCTTGAACAAAGGGCTGCAGAAGCAGACAGAATGAATCTAAATCCTCTAGGTAAAAGAAATGCTTCTTATTCGTCCTGTTATGATGTGTGGAAGTACATCTCTGAATTGGGAATTAGCAAGGTGCAACTGTCAGAAGGGGACATTGAAACCATTTTAAACACATTAGTCTTTGATGGCAAGGCAGAGATGTCACTCGTAGCTGATAGCAGTTCAAACACGTCATCAACAGGTGGACAAAAGAAACTTTTCAGGGCACTTGTGCCTCTTATGCCGGTTACAGGACTCATGAGGACACCATGTGGTGTTTGTCCGGTGTCAGATCGGTGTCGTGAAGGTGGGCCAATTTCTCCAAGCAAGTGTGTCTACATGAAGGAGTGGCTGTCAGAGCTCTAGTGAAGGAAGTCTTAGAAATGGATGAgaagtattttatttcaaaagggTAATTTTTGTATTAATATTGAGTAAACACTGCAAAGCAGTGGATTATGAGCTGTACAAATACCAGGTTTTGTTACTGTATTAAAGCTGTTATTTAAGAGATAtgaattaaaatgaaatgttctGAGGCCCATTATAATATTGAAAACTGTTGAAGCCCAATTGCTTATAGGTCTTGAGACAATAAACGATTGGTATATTTAAATCAAGAACAGTGGTCCAGTTTTATATCAAGTGCAAAATGCTGAGCACACAGCTCCATGACGTTTTACCCTGTCTCGCTTCGACAACTGCTGCACAATAGCTTTTGATCACTTTGGGCAACAATCTACGAGGGAATGAGGGAATAGTCACAGAATAAGTTCCTTTAAGGCATGATTAGTATACCTGTGTTACTATGCACTGATTGGAGGATGCCAAGCAAACTCCCCAAATAACTACATATCTAATGGCTGATTTACATGGTATGTGGTTGCTGTAAGCATATGATCTGAGTTATATTGTGTAACTAAATTTTACATGTATATGTAACTTGTTTGTCCCAGGTTCGATTTACAGAAGACAACTCTTGTTGTAAGGTTAACTCagttgtaaaaacaaaacacgTGACAATGTTTTACTGCCTTGATAATGCTAGGTACCATTGTGTTCATTGCTAGATTTTAATTTCGGGCGACCGAAAGTGCCCTCAATCCTAATCTAGTTGCTAATCTATGCATGTGTGGTATGTGTGTAGCCAGCTTTCGTTTGAACTTGCACAAGGAATGCATAGAATGCAATCAGATATGCATGTTTAGACCTTCTATCACGTGAAACTTGCATAAAGCACAAGGATAAAGAAATCTGAGCTTCCTTCAATCAATATCACCTGCACTCTCTAACCTTTTGGTTATTACTgcattaaaataaatatactcAGGAGGACAAagttaatgacaaaaaaatacttttaat

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05158 all species →	RNA_pol_Rpc34	RNA polymerase Rpc34 subunit	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007832 all species →	Family	RNA polymerase Rpc34	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR016049 all species →	Family	RNA polymerase Rpc34-like	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12780 all species →	RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005666 all species →	Cellular Component	RNA polymerase III complex	Interproscan
GO:0006383 all species →	Biological Process	transcription by RNA polymerase III	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03025	RPC6, POLR3F; DNA-directed RNA polymerase III subunit RPC6	-	Transcription machinery	ko03021	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.